Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 1e-10 >seq2 Length=2687137 Score = 82.4 bits (90), Expect = 1e-10 Identities = 156/224 (70%), Gaps = 12/224 (5%) Strand=Plus/Plus Query 50281 ACACTTGAAGTTGGAGACTTGGTTAAAAGACAA-TTGATAGATGGTGATGATGTACTATT 50339 || ||| || |||||||| | || ||||||| |||| |||||||| | ||| || || Sbjct 640804 ACGCTTCAAATTGGAGACATCGTGGAAAGACATCTTGAG-GATGGTGACGTTGTCCTTTT 640862 Query 50340 AAATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACC 50399 |||||||| || | | |||| | ||| || | | | | |||||||| || Sbjct 640863 CAATAGGCAGCCTTCTTTGCATAGACTTTCCATTCTCTCTCATTTTGCTAAAATTCGTCC 640922 Query 50400 AGTAAAAACATTTA----AAATGAATTTAGCTATG-ACTAAAGCATATAATGCTGATTTT 50454 | ||| |||| |||||||| | |||| ||| |||| ||||| |||||| Sbjct 640923 TTGGAGAACGTTTAGGCTAAATGAATGTG--TATGCACTC---CATACAATGCCGATTTT 640977 Query 50455 GATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGC 50498 ||||| || ||||||||||||||||| || ||| || | | ||| Sbjct 640978 GATGGTGACGAAATGAATTTACATGTCCCACAAACAGAAGAAGC 641021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531113576960