Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq2 82.4 1e-10
>seq2
Length=2687137
Score = 82.4 bits (90), Expect = 1e-10
Identities = 156/224 (70%), Gaps = 12/224 (5%)
Strand=Plus/Plus
Query 50281 ACACTTGAAGTTGGAGACTTGGTTAAAAGACAA-TTGATAGATGGTGATGATGTACTATT 50339
|| ||| || |||||||| | || ||||||| |||| |||||||| | ||| || ||
Sbjct 640804 ACGCTTCAAATTGGAGACATCGTGGAAAGACATCTTGAG-GATGGTGACGTTGTCCTTTT 640862
Query 50340 AAATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACC 50399
|||||||| || | | |||| | ||| || | | | | |||||||| ||
Sbjct 640863 CAATAGGCAGCCTTCTTTGCATAGACTTTCCATTCTCTCTCATTTTGCTAAAATTCGTCC 640922
Query 50400 AGTAAAAACATTTA----AAATGAATTTAGCTATG-ACTAAAGCATATAATGCTGATTTT 50454
| ||| |||| |||||||| | |||| ||| |||| ||||| ||||||
Sbjct 640923 TTGGAGAACGTTTAGGCTAAATGAATGTG--TATGCACTC---CATACAATGCCGATTTT 640977
Query 50455 GATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGC 50498
||||| || ||||||||||||||||| || ||| || | | |||
Sbjct 640978 GATGGTGACGAAATGAATTTACATGTCCCACAAACAGAAGAAGC 641021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628531113576960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |