Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 226 7e-54 seq2 84.2 5e-11 >seq1 Length=3325186 Score = 226 bits (250), Expect = 7e-54 Identities = 496/737 (67%), Gaps = 7/737 (1%) Strand=Plus/Plus Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||||||||||||||| | || | ||||| || || ||||||||||| |||| ||| | Sbjct 2235332 GAACGTCCTCAACACTTAATTATGCGTGTCGCTATCGGTATTCATGGTGATGACATTGCA 2235391 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 ||||||||| || | | | ||| | ||| | | ||| || ||||||| Sbjct 2235392 AGGGTTATTGAAACCTACAACTTTATGAGTCAGAAGTATTTCACTCACGCCTCTCCTACT 2235451 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542 || |||||||| || || | |||| || | || || |||||| | | || Sbjct 2235452 CTGTTTAACGCTGGTACCCCTCACCCACAAATGTCGTCATG-TTTCTTAGTTGCCATGCG 2235510 Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602 ||||| || |||||||||||||||||| || | || ||| |||| | ||||| |||| Sbjct 2235511 GGATGACTCGATTGAAGGTATTTATGATACTTTGAAGGAATGTGCTTTAATTTCCAAAAC 2235570 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662 |||| ||||||||| | ||| ||||| ||||||| | | |||| | | || || Sbjct 2235571 TGCTGGTGGAATTGGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGG 2235630 Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722 | || ||| |||| | || || |||||||| | ||||| |||||| |||| || Sbjct 2235631 TACTAACGGTACTTCGAACGGTATTATTCCAATGGTGAGAGTTTTCAACAACACCGCTCG 2235690 Query 110723 ATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779 ||||| ||||||||||| ||| | ||| |||||||| | || | ||||| || Sbjct 2235691 TTATGTTGATCAAGGTGGTAACAAGCGCCCTGGTGCATTTGCTTTGTACTTGGAACCATG 2235750 Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839 |||| | || || || | || | || ||||||| || || ||| || ||| || Sbjct 2235751 GCATGCGGACATCTTCGCCTTTATTGACATTCGTAAGAACCATGGAAAAGAGGAAATCAG 2235810 Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899 ||| | ||| |||| || | ||||| | ||| | ||||||||| | || || | Sbjct 2235811 AGCCAGAGATCTATTCCCGGCTCTATGGATCCCTGATCTGTTCATGAAAAGGGTCGAACA 2235870 Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGG 110959 |||||| ||| | || | | ||| | ||||||| || | || || || || Sbjct 2235871 GAATGGCGAATGGACCCTGTTCTCTCCAAGTGAGGCTCCTGGCCTTGCCGACGTCTACGG 2235930 Query 110960 AAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCAAACAAA 111018 | || |||||||| || ||||||| ||| ||||| ||||| | | ||||| | Sbjct 2235931 CGATGAATTTGAAGAACTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAAC-CA 2235989 Query 111019 TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTT 111078 | ||| ||| | ||||||| | ||||| || |||| ||||| || ||||| | Sbjct 2235990 TCAAAGCCCAAAAGCTTTGGTACGCCATCCTCGAGGCACAGACAGAAACCGGTACTCCAT 2236049 Query 111079 ATATTTTGTATAAAGAT 111095 || |||||||| ||| Sbjct 2236050 TCATGTTGTATAAGGAT 2236066 Score = 95.1 bits (104), Expect = 3e-14 Identities = 172/249 (69%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 72160 CCAGAAGTTACTTTGCCAAACACAACGTGTTTGTTATTTAAATGTGGTTGAGGTGCAAGT 72219 |||| | | ||||| |||||||| || || ||||||| | ||| || ||| || Sbjct 1099153 CCAGCAATAACTTTTCCAAACACTACATGCTTGTTATCCAGATGAGGAGTAGGGACAGTG 1099094 Query 72220 GTAATGAAGAATTGCGAGTTATTTGAATCAGGACCCGAGTTAGCCATAGAAACCA-AACC 72278 ||||| |||||||| || ||| | | || || | ||| ||||| || | | || | Sbjct 1099093 GTAATAAAGAATTGAGATCCATTAGTTCCTGGTCCAGCGTTTGCCATGGAGAGAAGAAAC 1099034 Query 72279 TGCTTCTGAATGCTTTAATAAGAAATTCTCATCTTCAAAAGTTTCTCCATATATACTTTG 72338 |||| | | || | ||| |||||| ||||||||||| ||||||||||||| | Sbjct 1099033 GGCTTGTCA-TGAGTCAATTGGAAATTTTCATCTTCAAATTTTTCTCCATATATGGACTC 1098975 Query 72339 ACCTGAGCTTCCATCAAAGTTCACAATATCACCTCCTTGAACCATAAAATTATTAATTAC 72398 |||| | || | | || || ||||| ||||||||||| |||| ||||| | Sbjct 1098974 ACCTCCAGTACCGTTACCATTGGTAAAGTCACCACCTTGAACCATGAAATCTTTAATGAT 1098915 Query 72399 TCTATGGAA 72407 ||||||||| Sbjct 1098914 TCTATGGAA 1098906 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365 ||||| ||| || ||||| || || || || | ||||| ||| | ||||||||| Sbjct 1101659 AGACACCTGATGGATGATGATCCTGTCCTATTTAACCGTCAACCTTCATTACATAAAATG 1101718 Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGT 305425 || |||||||| |||| |||||||||| | | | || ||| || ||||| || | Sbjct 1101719 TCCATGATGGCACATAGAGTCAAAGTAATGCCCTACTCTACTTTTAGACTAAATTTATCT 1101778 Query 305426 GCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 | | || |||||||| ||||| || || ||||||||||| | ||||| || ||| Sbjct 1101779 GTCACATCACCCTATAATGCTGATTTCGACGGTGATGAAATGAACTTACATGTTCCACAA 1101838 Query 305486 TC 305487 || Sbjct 1101839 TC 1101840 >seq2 Length=2687137 Score = 84.2 bits (92), Expect = 5e-11 Identities = 145/210 (69%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 131800 AAAGAAA--GCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACA 131857 ||||||| || || ||||| || | ||||||| ||||| ||| || || | Sbjct 443218 AAAGAAAAGGCTGACTGGGCCATGAGATGGATTGCCGATGACGATGCTTTGTTCGCTGAA 443159 Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917 | | || || || ||| |||||||||||| |||||||| || ||||| | ||||| Sbjct 443158 CGTTTGGTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTTTCGGGCTCTTTCGCTTCTATC 443099 Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCG 131977 || ||| | || ||| | || | ||||| || | | || |||||| | | || | Sbjct 443098 TTCTGGTTGAAAAAGAGAGGTCTTATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGC 443039 Query 131978 AGAGATGAAGCATTGCATACTGAATTTGCT 132007 |||||||||| ||| || || || |||||| Sbjct 443038 AGAGATGAAGGATTACACACCGACTTTGCT 443009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812632733571