Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq2 114 3e-20
seq1 87.8 4e-12
>seq2
Length=2687137
Score = 114 bits (126), Expect = 3e-20
Identities = 159/222 (72%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| || ||| || | || || || || || || |||||||| ||
Sbjct 1170123 AAAATG---CAGATTTTCGTCAAGACCTTAACCGGTAAGACCATTACCTTGGAAGTCGAG 1170067
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
|| ||||| |||| || ||| ||||||||||| || ||||||||| ||
Sbjct 1170066 TCCTCCGACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCT 1170007
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| ||| | | || || || || ||||| |||||||| || || ||| || ||||
Sbjct 1170006 GACCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTGTCCGAC 1169947
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|||||| ||||||| ||||||||| | ||||| ||| |||||
Sbjct 1169946 TACAACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGA 1169905
>seq1
Length=3325186
Score = 87.8 bits (96), Expect = 4e-12
Identities = 156/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|| ||||| || | ||||| || |||| || | || ||| | | ||| || |
Sbjct 2236068 GCATCCTTATACAACATGAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGCGTAC 2236009
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
||||| | ||||||||| | ||| ||| | | ||||| ||||||||||| || ||
Sbjct 2236008 CAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTAC 2235949
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286
|| ||||| || || | ||||| | ||| |||| || ||||| || | ||| | ||
Sbjct 2235948 AGTTCTTCAAATTCATCGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTGGAGAGAAC 2235889
Query 173287 AGACTCCAATTTCCA-TCGGTCTCGACCCTCTTCATGAAGAGGTC 173330
|| |||| | ||| || || |||||||| |||||||| || ||
Sbjct 2235888 AGGGTCCATTCGCCATTCTGT-TCGACCCTTTTCATGAACAGATC 2235845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820633437131
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |