Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 345 6e-90 seq2 241 2e-58 seq4 84.2 3e-11 >seq1 Length=3325186 Score = 345 bits (382), Expect = 6e-90 Identities = 1233/1907 (65%), Gaps = 53/1907 (3%) Strand=Plus/Minus Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422 |||| || | |||||||||||||| | | || | || ||||| || |||||||||| Sbjct 2237111 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 2237052 Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482 | || || | ||| |||| || ||||| ||||| || || | ||| | ||| Sbjct 2237051 CAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTG 2236992 Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542 || | ||||| |||| ||| ||| ||| ||||| | ||| ||| || || | Sbjct 2236991 GAGACATCAGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCAG 2236932 Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATAT 68602 |||| | || ||| ||||||||| || ||||||| |||||| ||| ||||| | Sbjct 2236931 CCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGTT 2236872 Query 68603 CATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGA 68659 || |||| | | | |||||||||||| || || || || || ||| || | Sbjct 2236871 GCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTCA 2236812 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 | | ||| | ||| | ||| || | | | | | | |||||||| |||| Sbjct 2236811 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 2236752 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 | ||||| |||| ||| || | ||| | ||| || ||| ||||| ||||| | | | | Sbjct 2236751 GGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACT 2236692 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA- 68838 | || | |||| ||| || | |||||| ||||| ||||||||||| || | || | | Sbjct 2236691 CGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAG-AAGCGAG 2236633 Query 68839 TTTCTAAGACCATGT-GTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGA 68897 ||||||||||| ||| | || || || |||| || | ||| ||||| || ||||| Sbjct 2236632 TTTCTAAGACC-TGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGA 2236574 Query 68898 TGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATA 68957 || | ||| | ||| || || | ||| || | | ||| || || | | | Sbjct 2236573 GGGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAA 2236514 Query 68958 TGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATA 69017 ||||| |||| |||||||| | |||| ||| | || || || || || | || Sbjct 2236513 GGTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTA 2236454 Query 69018 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATG 69077 || ||||||||||||| |||| || | | || ||| || ||| ||||| | | Sbjct 2236453 GATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGG-ATTC 2236395 Query 69078 TAAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCT 69136 | || || || ||||| || || || ||||| |||| | | || ||||||| | | Sbjct 2236394 TCAACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCA 2236335 Query 69137 TATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGAT 69196 | || || || ||| ||||||| || || || || | || |||||| | || | | Sbjct 2236334 TGTTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGT 2236275 Query 69197 TTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT----CAAATCGTC----- 69247 | || || || || | ||| | || || ||| | | || || Sbjct 2236274 TACGAGTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTAT 2236215 Query 69248 CATCTAT---AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGC---TACCT 69301 |||| | |||||| || || | ||| || | ||||| || || | | | Sbjct 2236214 CATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTT 2236155 Query 69302 CATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCA 69361 | ||| | ||| | | ||||| ||| || ||| |||| || |||| Sbjct 2236154 CTGGGGAA---GAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCA 2236098 Query 69362 GATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAG 69421 || | ||| || | || |||||||| || ||||| || | || || |||||||| | Sbjct 2236097 AGTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGG 2236038 Query 69422 TTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGT 69481 |||| |||| | |||| || | | ||||| || || || ||| |||| Sbjct 2236037 TTTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT---GGT-TTGT 2235982 Query 69482 A----ACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA 69537 ||| || ||||| ||| | || || ||| |||||||| || | || Sbjct 2235981 CTTCCACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACG 2235922 Query 69538 TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACT 69597 || | | |||||| ||| ||||| | | || | ||| | ||| | | || Sbjct 2235921 TCGGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACC 2235862 Query 69598 CGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCT 69657 | |||||| || ||||| || ||||| ||||| || |||||||||| ||| |||| Sbjct 2235861 CTTTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCC 2235802 Query 69658 TCATTTCCTGTAttttttttAAGA---TCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 || ||||| || || ||| || || | ||| | | || || | |||||||||| Sbjct 2235801 TCTTTTCC---ATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGT 2235745 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 || | || | || | | || || || || || || || ||||| | || | || Sbjct 2235744 TCCAAGTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCG 2235685 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 ||||| || | ||||||| ||| ||||||||||| || || |||| || || |||| | Sbjct 2235684 GTGTTGTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCA 2235625 Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894 || || |||| | || ||||||||| ||| | ||| ||||| || || |||| Sbjct 2235624 ATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTG 2235565 Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATG 69954 || |||| |||||| ||||| || ||||| ||||| || || ||||| |||| Sbjct 2235564 GAAATTAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATG 2235505 Query 69955 TTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGA 70014 || | ||||| |||||||| | || || || || ||||| | |||||| Sbjct 2235504 GCAACTAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGA 2235445 Query 70015 GATGCGTGAGTGAACCATTT----TTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTC 70070 || ||||||||||| | || ||| |||| ||||| ||||||||| | | | Sbjct 2235444 GAGGCGTGAGTGAAATACTTCTGACTCATAAAG----TTGTAGGTTTCAATAACCCTTGC 2235389 Query 70071 TATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTA 70129 || || ||| |||||| || || ||||||||||| | | || ||||| |||||| Sbjct 2235388 AATGTCATCAC-CATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTG 2235330 Query 70130 CCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGT 70189 | || ||| ||| ||| ||||| ||| |||||| || || || ||||| || | Sbjct 2235329 CAACATTGCCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAAT 2235270 Query 70190 TGTA-TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 | || |||||| ||||| ||||| | |||| |||| || || | ||| Sbjct 2235269 TATACTGAAAA-TCTCTATCGTAGACAATAGCAGAGTTCAGCTCATC 2235224 >seq2 Length=2687137 Score = 241 bits (266), Expect = 2e-58 Identities = 576/862 (67%), Gaps = 12/862 (1%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| ||| ||| | || ||||| || || || || || |||| || || || Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||||||||| ||||| || | || || |||||| || | || | Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | |||||| ||||| || || | || ||||| || |||||||| | | Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895 Query 39506 TTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 ||| || ||||| || || | | | || |||||| || || || |||||||| || || Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCT-TTTTTCAATCTCGACAGCCTCTGTAATAAT 442954 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | | || | || ||||| | | | || || || | ||||| || || Sbjct 442955 CTTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAA 443014 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 ||| |||| || |||||||| | ||| | || || || || || | || ||||| Sbjct 443015 GTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 443074 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 ||||| | |||||| | ||| || || | ||| ||||| || ||||||||||| ||||| Sbjct 443075 AAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTC 443134 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTT 39801 || || || || ||||| | | || || | | ||| | || ||||| | Sbjct 443135 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCT 443194 Query 39802 CTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGAT 39860 | ||||| ||||| || |||||| | ||| || || || || || ||||| || | Sbjct 443195 CATGGCCCAGTCAGCCTT-TTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGA 443253 Query 39861 AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920 | | ||| | |||||| | || ||||| || |||| || |||| || | Sbjct 443254 ATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGT 443313 Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980 ||||||| || ||| || ||||| |||||||||||| ||||||| | || ||| |||| Sbjct 443314 GGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCT 443373 Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040 | | | || ||||| ||||||||||||| || || |||||| || |||||||| | Sbjct 443374 CAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAA-G 443432 Query 40041 CCAATACATGTTTA-ATAAAATATTTTTCATCGGGTGTCA---ATTTATTCCAGTCATTG 40096 ||| | | | | |||||||| || |||| | ||| ||||||||||||| Sbjct 443433 GCAAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCATGC 443492 Query 40097 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTAC 40156 | ||| ||| | |||| ||| || || |||||||| || || || |||| ||||||| Sbjct 443493 AAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTAC 443552 Query 40157 ATGTTCCATATATCACGATATT 40178 || | ||| || || |||||| Sbjct 443553 ATTTGCCAGATGTCGTGATATT 443574 >seq4 Length=1577441 Score = 84.2 bits (92), Expect = 3e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 68367 ATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGT 68426 ||| | || ||||| |||| ||||| || | ||| || | || |||||||| || || Sbjct 404202 ATCAATTGAAAACTTGATGGCAGAGGAGGCTGCTTTAGTTCTTAAGTAGTACATGCCTGT 404261 Query 68427 TTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATC 68486 || |||||| |||| |||| || ||||| ||| || || | |||| | Sbjct 404262 CTTTAGACCTTTTTTCCAGGCGTAAAAGTGCATTGCTGTAAGCTTCCCTCTATTTGGTTT 404321 Query 68487 GGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCAT 68546 ||| | || | |||||| ||| ||| || || || ||||||||||| ||||| Sbjct 404322 GGCCAGATACAAATTCATACTCTGAGATTGGTCAATAAATCGGCCTCTATCTGCAGCCAT 404381 Query 68547 TTTTATAAT-ACTCTTTTGAGGAATTTCCCAAATAGTCTT 68585 |||||| | |||| |||||| ||| ||||| | |||||| Sbjct 404382 GTTTATAGTGACTC-TTTGAGAAATCTCCCATACAGTCTT 404420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908705550040