Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2 208 6e-49
>seq2
Length=2687137
Score = 208 bits (230), Expect = 6e-49
Identities = 567/851 (67%), Gaps = 29/851 (3%)
Strand=Plus/Minus
Query 43719 AATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAG 43778
||||||| ||||| ||||||||||||||| | || | || || |||||||| || || |
Sbjct 443574 AATATCACGACATCTGGCAAATGTACAAACAGGCCGAAGCTTCCTTTTGGACTGCCGAGG 443515
Query 43779 AAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTG--CATTAAAACCACAA-GAAAAA 43834
|| | || ||| || || || ||| | |||| | | | ||| |||| || ||
Sbjct 443514 AAATAGACTTGGGAAAGGATTT-GCATGACTGGAATAATCGTATGAACGACAATGAGAAG 443456
Query 43835 CATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAAT 43894
||||||| ||| ||| | || ||||||||||| || || || ||||||||||||
Sbjct 443455 TATTTTATCTCTAGAGTTCTTGCCTTTTTTGCTGCCTCTGATGGTATTGTCAATGAAAAT 443396
Query 43895 TTGGTTAGTCGGTTT-GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTT 43953
||||| || |||| || |||||| | || |||||| ||||||||| || ||
Sbjct 443395 TTGGTGGAAAACTTCAGCGCT-GAGGTTCAACTTCCCGAAGCAAAATGTTTTTACGGTTT 443337
Query 43954 TCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013
|||||| || || || || || || |||| ||| | |||| ||||| |||||
Sbjct 443336 TCAAATCATGATGGAGAACATCCACTCCGAAACTTACTCATTGTTGATTGATACTTACAT 443277
Query 44014 CAAAGATGGGCACGAGAAGCATCGA----TTGTTTAATGCGATAGAAACAGTACCTGCGA 44069
||||||| || |||| | ||| ||||| ||||| || || || | || |
Sbjct 443276 CAAAGATC--CAAAAGAATC--CGAATTCTTGTTCAATGCCATCGAGACCATTCCATGTA 443221
Query 44070 TTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---ATTCAAATGATTCTTTTGGAG 44126
| ||| | || || ||||||||| | | |||||| || ||| || || | |
Sbjct 443220 TCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTGCCGATGACGATGCTTTGTTCGCTG 443161
Query 44127 AACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCA 44186
|||| | || || || || | ||| ||||| || |||||||| || || || || | |
Sbjct 443160 AACGTTTGGTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTTTCGGGCTCTTTCGCTTCTA 443101
Query 44187 TATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAA 44246
| || ||||| || || ||||| | ||||| || ||||| || || |||||| | ||
Sbjct 443100 TCTTCTGGTTGAAAAAGAGAGGTCTTATGCCAGGTTTGACCTTCTCCAATGAGCTTATTT 443041
Query 44247 GTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACG 44306
| | |||||||| ||||| ||| |||||||||||| || || | || | | |
Sbjct 443040 GCAGAGATGAAGGATTACACACCGACTTTGCTTGCTTGCTA-TTCTCTCACTTGAACAAC 442982
Query 44307 ATAAGCCTTCATGTAAGACAA---TTACAGATATTGTTGTAGAGGCAGTAAAGATAGAAC 44363
| |||| || || || || | | ||| || |||||| || |||| |||
Sbjct 442981 A-GAGCC----AGTGAGGAAATCGTTGAAAAGATTATTACAGAGGCTGTCGAGATTGAAA 442927
Query 44364 AAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGAACTTTTGATG 44422
|| || | ||| || | ||||| || | |||||||| || | ||||||
Sbjct 442926 AAAGATACTTCACAGATGCTCTTCCTGTTTCCTTGCTGGGAATGAACTGCA-GCTTGATG 442868
Query 44423 AACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACAC 44482
||| ||| |||| | | |||| ||| | |||| | | ||||| | | |||
Sbjct 442867 TGCCAGTATGTTGAGTTCGTTGCTGATAGACTACTGGTAGCTCTGGGCAACAAAAAAGTG 442808
Query 44483 TATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAAC 44542
|| | || || || |||||||| ||||| || ||||| |||| || || || |||
Sbjct 442807 TACAACGTCACCAATCCATTTGATTTCATGGAGAACATTTCTTTGGCTGGTAAGACCAAC 442748
Query 44543 TTTTTTGAAAA 44553
|| || |||||
Sbjct 442747 TTCTTCGAAAA 442737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455946716055
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |