Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 122 7e-23 >seq1 Length=3325186 Score = 122 bits (134), Expect = 7e-23 Identities = 301/451 (67%), Gaps = 7/451 (2%) Strand=Plus/Minus Query 131634 CGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGAT 131693 |||| |||||||| || | ||||| |||| ||| || | ||||| || || |||| Sbjct 2235878 CGCCATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGAT 2235819 Query 131694 CTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAA-AAAGTCCAAAATG 131752 |||| ||| | | || ||| | || || || || || | || |||| | || ||| Sbjct 2235818 CTCTGGCTCTGATTTCCTCTTTTCC-ATGGTTCTTACGAATGTCAATAAAGGCGAAGATG 2235760 Query 131753 TCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGA 131809 ||||||||||| |||||||| |||| || | ||| || |||| ||||| |||||| Sbjct 2235759 TCCGCATGCCATGGTTCCAAGTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGA 2235700 Query 131810 TTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTT 131869 | ||||| |||| | |||||||| | || | || ||| || | |||||| | | Sbjct 2235699 TCAACATAACGAGCGGTGTTGTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTA 2235640 Query 131870 CCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATA 131929 || || || | ||||||| || |||| | || || |||| || | ||||| Sbjct 2235639 CCGTTAGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATT 2235580 Query 131930 CCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCAC 131988 || || || || ||| || |||| || |||| | | ||| | ||| |||||||| | Sbjct 2235579 CCACCAGCAGT-TTTGGAAATTAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAAT 2235521 Query 131989 GCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGC 132048 ||| | ||| | ||||| || || || |||| ||| ||||| || || || Sbjct 2235520 CGAGTCATCCCGCATGGCAACTAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGC 2235461 Query 132049 TGAAAACAATGTGGGGCTGGCGTGTGTAAAA 132079 ||||| || || |||||| || ||| Sbjct 2235460 GTTAAACAGAGTAGGAGAGGCGTGAGTGAAA 2235430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934343032232