Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 7e-23
>seq1
Length=3325186
Score = 122 bits (134), Expect = 7e-23
Identities = 301/451 (67%), Gaps = 7/451 (2%)
Strand=Plus/Minus
Query 131634 CGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGAT 131693
|||| |||||||| || | ||||| |||| ||| || | ||||| || || ||||
Sbjct 2235878 CGCCATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGAT 2235819
Query 131694 CTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAA-AAAGTCCAAAATG 131752
|||| ||| | | || ||| | || || || || || | || |||| | || |||
Sbjct 2235818 CTCTGGCTCTGATTTCCTCTTTTCC-ATGGTTCTTACGAATGTCAATAAAGGCGAAGATG 2235760
Query 131753 TCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGA 131809
||||||||||| |||||||| |||| || | ||| || |||| ||||| ||||||
Sbjct 2235759 TCCGCATGCCATGGTTCCAAGTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGA 2235700
Query 131810 TTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTT 131869
| ||||| |||| | |||||||| | || | || ||| || | |||||| | |
Sbjct 2235699 TCAACATAACGAGCGGTGTTGTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTA 2235640
Query 131870 CCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATA 131929
|| || || | ||||||| || |||| | || || |||| || | |||||
Sbjct 2235639 CCGTTAGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATT 2235580
Query 131930 CCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCAC 131988
|| || || || ||| || |||| || |||| | | ||| | ||| |||||||| |
Sbjct 2235579 CCACCAGCAGT-TTTGGAAATTAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAAT 2235521
Query 131989 GCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGC 132048
||| | ||| | ||||| || || || |||| ||| ||||| || || ||
Sbjct 2235520 CGAGTCATCCCGCATGGCAACTAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGC 2235461
Query 132049 TGAAAACAATGTGGGGCTGGCGTGTGTAAAA 132079
||||| || || |||||| || |||
Sbjct 2235460 GTTAAACAGAGTAGGAGAGGCGTGAGTGAAA 2235430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934343032232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |