Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 197 2e-45
seq2 114 2e-20
>seq1
Length=3325186
Score = 197 bits (218), Expect = 2e-45
Identities = 887/1388 (64%), Gaps = 43/1388 (3%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||||||||| | || || ||||| || || || || | |||||| || || | || ||
Sbjct 2236723 GTAGATGTTAGAAGTATAAGGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGA 2236664
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
|| || ||||| ||||| | | ||| ||| | |||||| || | || |
Sbjct 2236663 AGCAGTAGGCATAGGTGCAACTAGAAGCGAGTTTCTAAGACCTGTCGAAATAATCTTGGC 2236604
Query 110827 CTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
||||| ||||| || | | | || | ||| ||||||| ||| ||||
Sbjct 2236603 TTTGAGTGACTCCCATTCCCACAGCTCAGAGGGCTTTTTG--TCCCACAAATCATACTGC 2236546
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944
| | || || || || |||||||| | ||||||||| || | |||| | | ||
Sbjct 2236545 AAAATACCCTGAGATGCTGGAGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACGGCT 2236486
Query 110945 AATTCACAGCTCG---CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
||||| ||||| | |||| || | | || || || ||||| || || | |||
Sbjct 2236485 AATTC---GCTCGAGGCTTCCAAGGCTCCATGGTAGATAGTTTCGAAAATCTGGATATTA 2236429
Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061
| | ||| || || |||||||||| | | || || || |||| || | |
Sbjct 2236428 AGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTCAACTTCATGAAAGCATCAGCTAAA 2236369
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---A 111118
||||||||||| | | |||| ||||| | ||||| || || || | || ||| |
Sbjct 2236368 CCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGGA---TCTCCTAGCCTCTGGA 2236312
Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178
|| || || | |||||||| || | || ||| | || || || | ||| |||||
Sbjct 2236311 ACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGAGTGACCACCTTCGTGATG 2236252
Query 111179 TCATGAAGTTTTTCATA-----ATCAAAAGTGCGAGTCTCTTC---ATTGACATACTTTG 111230
||||| || |||||| | | ||| ||| |||| || || | ||| | ||
Sbjct 2236251 TCATGCAGCTTTTCAAAGTTGTACCAACAGT--GAGTATCATCGGTTTCAACAAAGGCTG 2236194
Query 111231 GAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAA 111290
|||| || || || ||||| || || ||||| || || || | ||||| | ||
Sbjct 2236193 GAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAA 2236134
Query 111291 TTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGT 111350
| || ||| | ||| || ||||| ||||| ||||| ||||| | |||||||
Sbjct 2236133 TCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGT 2236074
Query 111351 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAG 111410
| || |||||||| || | |||| | || || || || || ||||||| | ||| || |
Sbjct 2236073 TACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGG 2236014
Query 111411 CCTTCCAAACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468
| | ||||| | ||| || | || | | | || || ||| ||||| |
Sbjct 2236013 CGTACCAAAGCTTTTGGGCTTTGATGGTTTGTC--TTCCACGACCTTCCTTTTCGTATCT 2235956
Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528
| ||| || ||||||| || || || |||||| || || || |||| |||
Sbjct 2235955 TTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTGG 2235896
Query 111529 ACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 111588
| |||| || | ||||| ||| | || |||| |||||||| || || || |||||
Sbjct 2235895 AGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCCA 2235836
Query 111589 CAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 111647
|| | | || |||||||| | | || || || | || ||||| || | |
Sbjct 2235835 TAGAGCCGGGAATAGATCTCTGGCTCTGA-TTTCCTCTTTTCCATGGTTCTTACGAATGT 2235777
Query 111648 CAAGGAACTCCATGATATCCGCGTGCCATGGCT-CAAG---ATAG--ACTGCGATAGATC 111701
||| || | | ||| ||||| |||||||| | |||| | || | ||| || |
Sbjct 2235776 CAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGTACAAAGCAAATGCACCAGGGC 2235717
Query 111702 CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 111761
||| | ||| |||||| ||||| || || ||| ||| || || | | |||||
Sbjct 2235716 GCTTGTTA---CCACCTTGATCAACATAACGAGCGGTGTTGTTGAAAACTCTCACCATTG 2235660
Query 111762 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 111821
|||||||||| | || ||| || || || ||| ||| |||| | | ||
Sbjct 2235659 GAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGTGGCACGAATAT 2235600
Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881
||| ||||||| ||||| || ||||| || || ||| ||||| ||| | | ||
Sbjct 2235599 TATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTAAAGCACATTCCTTCAAAG 2235540
Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941
| |||| ||||| | || ||||| ||| |||| | | ||| || ||||| |
Sbjct 2235539 TATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTAAGAAACATGACGACATTT 2235480
Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGG 112000
| || || |||||||| || || || || || | |||||| |||| |||| | ||
Sbjct 2235479 GTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCGTGAGTGAA-ATACTTCTGA 2235421
Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060
||| || ||| || || | || ||||||| || || || || ||||| |||
Sbjct 2235420 CTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCACCATGAATACCGATAGCG 2235361
Query 112061 ACCCGCAT 112068
|| |||||
Sbjct 2235360 ACACGCAT 2235353
>seq2
Length=2687137
Score = 114 bits (126), Expect = 2e-20
Identities = 384/588 (65%), Gaps = 25/588 (4%)
Strand=Plus/Plus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| | || ||||||| | ||||||| ||||| |||||| | ||||
Sbjct 443010 GCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 443069
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
||||| ||||| | ||| |||||||| | |||| ||| || || || |||||||||
Sbjct 443070 GGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATA 443129
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCAT---CA 122835
|| || ||| || || |||| | ||||| ||||| | || | ||| ||
Sbjct 443130 CCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAA---AGCATCGTCATCGGCA 443186
Query 122836 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCA 122895
| |||| |||| ||||| | ||||| | | |||||||| | || | |||||| |
Sbjct 443187 ATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTG 443246
Query 122896 AATAA-----CTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAAT 122950
|| || | | |||||| | ||| || ||||| | |||||||| ||| |
Sbjct 443247 AACAAGAATTCGGATTCTTT-----TGGATCTTTGATGTAAGTATCAATCAACAATGAGT 443301
Query 122951 ATGTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCG 123009
| |||||| || | | | ||| || | |||| | |||| || | ||||||
Sbjct 443302 AAGTTTCGGAGTGGATGTTCTCCATCAT-GATTTGAAAACCGTAAAAACATTTTGCTTCG 443360
Query 123010 CTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 123069
| ||||||||| | || || | | ||| ||| ||||| ||||| ||
Sbjct 443361 GGAAGTTGAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAG 443420
Query 123070 CCAGCAAAGAATGCCAGGA-TGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGT 123125
||||||| || || || | | || || || | ||| ||||| || |||| | |
Sbjct 443421 GCAGCAAAAAAGGCAAGAACTCTA-GAGATAAAATACTTCTCATTGTCGTTCATACGATT 443479
Query 123126 CTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAATTGCTCATTTG 123185
|||||||| | | ||| || ||| || | ||| || ||||||||| | ||
Sbjct 443480 ATTCCAGTCATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTC 443539
Query 123186 AGCCTTTTTATAGAGTTCCCAGA-GTTGTGGATACTTCAGGGGGAAGA 123232
|||| ||| || | || ||||| || || |||| |||| |||||||
Sbjct 443540 GGCCTGTTTGTACATTTGCCAGATGTCGT-GATATTTCAAAGGGAAGA 443586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031913645600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |