Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 228 1e-54 seq2 129 7e-25 >seq1 Length=3325186 Score = 228 bits (252), Expect = 1e-54 Identities = 948/1475 (64%), Gaps = 57/1475 (4%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| || | || || || || || ||||| |||| |||||| || |||| || || Sbjct 2236722 TAGATGTTAGAAGTATAAGGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGAA 2236663 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| ||||| | ||||| ||| | ||||| | |||| | Sbjct 2236662 GCAGTAGGCATAGGTGCAACTAGAAGCGAGTTTCTAAGACCTGTCGAAATAATCTTGGCT 2236603 Query 118302 TTGAGAGCGTCCCAGTCGTA--GTTGAG----CTTTGTCTCCCCCTGCCACATATCAAAC 118355 ||||| | ||||| || | | | || |||| | |||| ||| |||| || Sbjct 2236602 TTGAGTGACTCCCATTCCCACAGCTCAGAGGGCTTTTTGTCCC------ACAAATCATAC 2236549 Query 118356 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415 || | ||||| || || ||||| || || | ||| || || || | || || | | Sbjct 2236548 TGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACG 2236489 Query 118416 GCCAATTCGGAGCTCG---CCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCA 118472 || |||||| |||| | || | |||| | || || || ||||| ||||| | | Sbjct 2236488 GCTAATTCG---CTCGAGGCTTCCAAGGCTCCATGGTAGATAGTTTCGAAAATCTGGATA 2236432 Query 118473 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCG 118532 || | | ||| ||||| |||||||| | || || || || || |||| || Sbjct 2236431 TTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTCAACTTCATGAAAGCATCAGCT 2236372 Query 118533 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC 118592 | |||||| ||||| | ||||||| | || | ||| || || ||| ||| ||| Sbjct 2236371 AAACCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGGATCTCCTAGCC-TCTGG 2236313 Query 118593 A-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 118651 | | || || | || || ||||||| || || | || ||||| ||||| ||||| Sbjct 2236312 AACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGAGTGACCACCTTCGTGAT 2236253 Query 118652 TTCATGAAGCTTTTC---GTAATCAAAACTGCGAGTCTCTTCATTG---ACATACTTAGG 118705 ||||| |||||||| || | ||| | |||| || || | ||| | || Sbjct 2236252 GTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTATCATCGGTTTCAACAAAGGCTGG 2236193 Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765 ||| || || || |||| ||||| |||| || || || || ||||| | ||| Sbjct 2236192 AAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAAT 2236133 Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825 || || | ||| || |||||| ||||||||||| || || | || |||| Sbjct 2236132 CTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGTT 2236073 Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885 ||| |||||||| || | |||| |||| || || || || || || | || ||| || || Sbjct 2236072 ACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGC 2236013 Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCT----CGCCCCTCTTCCTCGTACT 118941 | ||| | | ||| | || ||| || || || || | ||||| Sbjct 2236012 GTACCAAAGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATC 2235957 Query 118942 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 119001 || ||| || ||||||| || || || | | || | || || || |||| | || Sbjct 2235956 TTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTG 2235897 Query 119002 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 119061 | |||| || | ||||| ||| || || |||| |||||||| || || ||||||| Sbjct 2235896 GAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCC 2235837 Query 119062 AGAGCGCCGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 119120 | || |||| ||| ||||| | | | || ||| || | || || || ||| | Sbjct 2235836 ATAGAGCCGGGAATAGATCTCTGGCTCTGAT-TTCCTCTTTTCCATGGTTCTTACGAATG 2235778 Query 119121 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTA 119180 || | |||| | | ||| ||||| ||||| ||||||| ||||| || | || || | Sbjct 2235777 TCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGTACAAAGCAAATGCACC---A 2235721 Query 119181 CGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234 | || |||| | || | ||||| | || ||| ||| || || | | |||| Sbjct 2235720 GGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTGTTGAAAACTCTCACCATT 2235661 Query 119235 GGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGA 119292 ||||| ||||| | || || || || || ||| | || || |||| | | Sbjct 2235660 GGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG--TGGCACGAA 2235603 Query 119293 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 119352 || || ||||||| |||||| || || || || || ||| || || ||| | | Sbjct 2235602 TATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTAAAGCACATTCCTTCA 2235543 Query 119353 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 119412 | | | || || || || ||||||||| || | || | | ||| || ||||| Sbjct 2235542 AAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTAAGAAACATGACGACA 2235483 Query 119413 TTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT- 119471 |||| || || ||||||||||| || ||||| || | ||||| |||| |||| | Sbjct 2235482 TTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCGTGAGTGAA-ATACTTC 2235424 Query 119472 TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 119531 || ||| || |||||| || | || | |||||| || || ||||||||||| Sbjct 2235423 TGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCACCATGAATACCGATA 2235364 Query 119532 GAGACCCGCATAAACATGTATTG-GGGTGTT-TCCATCAGGATACCATCGAGCCTCTGGA 119589 | ||| ||||||| | || ||| || ||| | || || | |||| | ||| | | Sbjct 2235363 GCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACA--TTGCCATTAATTCTCAGAA 2235306 Query 119590 GGTAA-CTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 ||||| |||| ||||||||||||| ||||| || Sbjct 2235305 GGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 2235272 >seq2 Length=2687137 Score = 129 bits (142), Expect = 7e-25 Identities = 387/586 (66%), Gaps = 25/586 (4%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | || || || | | | || || ||||| |||||| || |||| Sbjct 443010 GCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 443069 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| ||||| | ||| ||||||||||| || | | || ||||| || |||||||| Sbjct 443070 GGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATA 443129 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAG----CAAAGGAGCGGGACTTTGTATC 130191 || || ||| ||||| |||| | ||| |||| ||||| | | | | | | | Sbjct 443130 CCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATC--GTCATCG--GC 443185 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250 || ||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || || Sbjct 443186 AATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATT 443245 Query 130251 CA--AAGAGTTC--CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAA 130306 | |||| ||| |||||| ||||||||||||||| |||| || | ||| Sbjct 443246 GAACAAGAATTCGGATTCTTT-----TGGATCTTTGATGTAAGTATCAATCAACAATGAG 443300 Query 130307 TATGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 130365 || |||||| |||| | | ||| || | ||| | |||| ||| | ||||| Sbjct 443301 TAAGTTTCGGAGTGGATGTTCTCCATCAT-GATTTGAAAACCGTAAAAACATTTTGCTTC 443359 Query 130366 GCTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 130425 | | || |||||| | || || | | ||| ||| ||||| ||||| || Sbjct 443360 GGGAAGTTGAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGA 443419 Query 130426 CCCAGCAAAAAACGCCAGGA-TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 130481 |||||||||| || || | | || || || | || ||||| ||||||| | Sbjct 443420 GGCAGCAAAAAAGGCAAGAACTCTA-GAGATAAAATACTTCTCATTGTCGTTCATACGAT 443478 Query 130482 TCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTT 130541 | |||||||| | | |||||| | |||| ||||| ||||||||| | || Sbjct 443479 TATTCCAGTCATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTT 443538 Query 130542 GAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 130587 |||| || || | || ||||| || | |||| |||| ||||| Sbjct 443539 CGGCCTGTTTGTACATTTGCCAGATGTCGTGATATTTCAAAGGGAA 443584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435114965160