Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 228 1e-54
seq2 129 7e-25
>seq1
Length=3325186
Score = 228 bits (252), Expect = 1e-54
Identities = 948/1475 (64%), Gaps = 57/1475 (4%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| || | || || || || || ||||| |||| |||||| || |||| || ||
Sbjct 2236722 TAGATGTTAGAAGTATAAGGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGAA 2236663
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| || ||||| ||||| | ||||| ||| | ||||| | |||| |
Sbjct 2236662 GCAGTAGGCATAGGTGCAACTAGAAGCGAGTTTCTAAGACCTGTCGAAATAATCTTGGCT 2236603
Query 118302 TTGAGAGCGTCCCAGTCGTA--GTTGAG----CTTTGTCTCCCCCTGCCACATATCAAAC 118355
||||| | ||||| || | | | || |||| | |||| ||| |||| ||
Sbjct 2236602 TTGAGTGACTCCCATTCCCACAGCTCAGAGGGCTTTTTGTCCC------ACAAATCATAC 2236549
Query 118356 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415
|| | ||||| || || ||||| || || | ||| || || || | || || | |
Sbjct 2236548 TGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACG 2236489
Query 118416 GCCAATTCGGAGCTCG---CCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCA 118472
|| |||||| |||| | || | |||| | || || || ||||| ||||| | |
Sbjct 2236488 GCTAATTCG---CTCGAGGCTTCCAAGGCTCCATGGTAGATAGTTTCGAAAATCTGGATA 2236432
Query 118473 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCG 118532
|| | | ||| ||||| |||||||| | || || || || || |||| ||
Sbjct 2236431 TTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTCAACTTCATGAAAGCATCAGCT 2236372
Query 118533 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC 118592
| |||||| ||||| | ||||||| | || | ||| || || ||| ||| |||
Sbjct 2236371 AAACCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGGATCTCCTAGCC-TCTGG 2236313
Query 118593 A-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 118651
| | || || | || || ||||||| || || | || ||||| ||||| |||||
Sbjct 2236312 AACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGAGTGACCACCTTCGTGAT 2236253
Query 118652 TTCATGAAGCTTTTC---GTAATCAAAACTGCGAGTCTCTTCATTG---ACATACTTAGG 118705
||||| |||||||| || | ||| | |||| || || | ||| | ||
Sbjct 2236252 GTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTATCATCGGTTTCAACAAAGGCTGG 2236193
Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765
||| || || || |||| ||||| |||| || || || || ||||| | |||
Sbjct 2236192 AAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAAT 2236133
Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825
|| || | ||| || |||||| ||||||||||| || || | || ||||
Sbjct 2236132 CTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGTT 2236073
Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885
||| |||||||| || | |||| |||| || || || || || || | || ||| || ||
Sbjct 2236072 ACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGC 2236013
Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCT----CGCCCCTCTTCCTCGTACT 118941
| ||| | | ||| | || ||| || || || || | |||||
Sbjct 2236012 GTACCAAAGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATC 2235957
Query 118942 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 119001
|| ||| || ||||||| || || || | | || | || || || |||| | ||
Sbjct 2235956 TTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTG 2235897
Query 119002 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 119061
| |||| || | ||||| ||| || || |||| |||||||| || || |||||||
Sbjct 2235896 GAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCC 2235837
Query 119062 AGAGCGCCGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 119120
| || |||| ||| ||||| | | | || ||| || | || || || ||| |
Sbjct 2235836 ATAGAGCCGGGAATAGATCTCTGGCTCTGAT-TTCCTCTTTTCCATGGTTCTTACGAATG 2235778
Query 119121 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTA 119180
|| | |||| | | ||| ||||| ||||| ||||||| ||||| || | || || |
Sbjct 2235777 TCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGTACAAAGCAAATGCACC---A 2235721
Query 119181 CGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234
| || |||| | || | ||||| | || ||| ||| || || | | ||||
Sbjct 2235720 GGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTGTTGAAAACTCTCACCATT 2235661
Query 119235 GGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGA 119292
||||| ||||| | || || || || || ||| | || || |||| | |
Sbjct 2235660 GGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG--TGGCACGAA 2235603
Query 119293 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 119352
|| || ||||||| |||||| || || || || || ||| || || ||| | |
Sbjct 2235602 TATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTAAAGCACATTCCTTCA 2235543
Query 119353 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 119412
| | | || || || || ||||||||| || | || | | ||| || |||||
Sbjct 2235542 AAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTAAGAAACATGACGACA 2235483
Query 119413 TTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT- 119471
|||| || || ||||||||||| || ||||| || | ||||| |||| |||| |
Sbjct 2235482 TTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCGTGAGTGAA-ATACTTC 2235424
Query 119472 TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 119531
|| ||| || |||||| || | || | |||||| || || |||||||||||
Sbjct 2235423 TGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCACCATGAATACCGATA 2235364
Query 119532 GAGACCCGCATAAACATGTATTG-GGGTGTT-TCCATCAGGATACCATCGAGCCTCTGGA 119589
| ||| ||||||| | || ||| || ||| | || || | |||| | ||| | |
Sbjct 2235363 GCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACA--TTGCCATTAATTCTCAGAA 2235306
Query 119590 GGTAA-CTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
||||| |||| ||||||||||||| ||||| ||
Sbjct 2235305 GGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 2235272
>seq2
Length=2687137
Score = 129 bits (142), Expect = 7e-25
Identities = 387/586 (66%), Gaps = 25/586 (4%)
Strand=Plus/Plus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| | || || || | | | || || ||||| |||||| || ||||
Sbjct 443010 GCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 443069
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||| ||||| | ||| ||||||||||| || | | || ||||| || ||||||||
Sbjct 443070 GGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATA 443129
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAG----CAAAGGAGCGGGACTTTGTATC 130191
|| || ||| ||||| |||| | ||| |||| ||||| | | | | | | |
Sbjct 443130 CCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATC--GTCATCG--GC 443185
Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250
|| ||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || ||
Sbjct 443186 AATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATT 443245
Query 130251 CA--AAGAGTTC--CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAA 130306
| |||| ||| |||||| ||||||||||||||| |||| || | |||
Sbjct 443246 GAACAAGAATTCGGATTCTTT-----TGGATCTTTGATGTAAGTATCAATCAACAATGAG 443300
Query 130307 TATGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 130365
|| |||||| |||| | | ||| || | ||| | |||| ||| | |||||
Sbjct 443301 TAAGTTTCGGAGTGGATGTTCTCCATCAT-GATTTGAAAACCGTAAAAACATTTTGCTTC 443359
Query 130366 GCTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 130425
| | || |||||| | || || | | ||| ||| ||||| ||||| ||
Sbjct 443360 GGGAAGTTGAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGA 443419
Query 130426 CCCAGCAAAAAACGCCAGGA-TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 130481
|||||||||| || || | | || || || | || ||||| ||||||| |
Sbjct 443420 GGCAGCAAAAAAGGCAAGAACTCTA-GAGATAAAATACTTCTCATTGTCGTTCATACGAT 443478
Query 130482 TCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTT 130541
| |||||||| | | |||||| | |||| ||||| ||||||||| | ||
Sbjct 443479 TATTCCAGTCATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTT 443538
Query 130542 GAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 130587
|||| || || | || ||||| || | |||| |||| |||||
Sbjct 443539 CGGCCTGTTTGTACATTTGCCAGATGTCGTGATATTTCAAAGGGAA 443584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435114965160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |