Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1 143 3e-29 seq2 93.3 5e-14 >seq1 Length=3325186 Score = 143 bits (158), Expect = 3e-29 Identities = 1071/1722 (62%), Gaps = 29/1722 (2%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| |||||||| || ||||| | || |||||||| || || | |||||| || Sbjct 2237070 GTACGCAGGTAGTACATACCAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTG 2237011 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | || || ||| | | || | || | ||||| | |||||| || |||||||| Sbjct 2237010 GTCAATTTACCCATAGTTGGAGACATCAGGTGAATGTTCAACGACTGAGATTGGTCGATA 2236951 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 || || | ||| || ||||| || |||| | |||||| | |||||||| | ||| Sbjct 2236950 TAGGCTGATCTGTCCGCAGCCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTC 2236891 Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGC---TTGTACGCTCCCACCGGCT 78426 |||| | | || || | || | |||| || ||| | | || | || Sbjct 2236890 TTATAAAGGCCTTTGAGTTGCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCT 2236831 Query 78427 CGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGGACC 78486 | || | ||| || || | | || ||| || | | | ||||| || | Sbjct 2236830 GAAATGATATGATTTTTCATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAAT 2236771 Query 78487 AGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTC 78546 | || | |||| || ||| || || || | || || ||||||||| | Sbjct 2236770 AAGTAAGGATTAACAATTTGGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAA 2236711 Query 78547 GTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATG 78606 || || || |||||| |||||||| |||| ||||||| || || || || ||||| Sbjct 2236710 GTATAAGGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATA 2236651 Query 78607 GGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------ 78660 ||||| || || || || || | |||||| || | |||| | | || || Sbjct 2236650 GGTGCAACTAGAAGCGAGTTTCTAAGACCTGTCGAAATAATCTTGGCTTTGAGTGACTCC 2236591 Query 78661 CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGAC 78720 | ||||| | ||| | | | |||||| || || | ||||||| || Sbjct 2236590 CATTCCCACAGCTCAGAGGGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGAT 2236531 Query 78721 GCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCG 78780 || || || || | || || ||||||| ||| ||||| ||| | ||||| || | Sbjct 2236530 GCTGGAGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCT 2236471 Query 78781 AGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTC 78840 || ||| | ||||| | || ||||| || | || || | |||| | Sbjct 2236470 TCCAAGGCTCCATGGTAGATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGA 2236411 Query 78841 TCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCG 78900 || || | | | | | ||||||| |||| || | || || || || | ||| Sbjct 2236410 GAATCAAATGGGATTCTCAACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCA 2236351 Query 78901 ATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCG 78960 || |||| | ||||||||| | | ||| | |||||| |||| | ||| Sbjct 2236350 ATTGGTCTATTACGCATGTTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCG 2236291 Query 78961 ATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAAT-- 79018 || | | ||||| |||||| ||||| ||| || | || | || || | || | Sbjct 2236290 ATAATTCTGTTCAAGTTACGAGTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTG 2236231 Query 79019 ---CAAAA-TGATTTCC-----TTTGATGAAAGTC-GGTAG-GCACAGCGATGCCAGGTT 79067 ||| | ||| | | ||| | |||| | || || ||| | || |||| ||| Sbjct 2236230 TACCAACAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA-ATAGAAGCCAAGTT 2236172 Query 79068 GCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGA 79127 || || || || || || ||| |||| ||| | || || || | ||||| || Sbjct 2236171 ACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGA 2236112 Query 79128 CTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACAT 79187 || ||| || | ||||||||||||| | |||| |||||| || ||||| || |||| Sbjct 2236111 TTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACAT 2236052 Query 79188 GTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCG 79247 | | || || ||||| || ||| || ||| | | ||| ||| | | |||| Sbjct 2236051 GAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTT 2235992 Query 79248 GACAACCT-TCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCT 79306 || | |||| || |||| | |||| | ||||| || | || | | Sbjct 2235991 GATGGTTTGTCTTCCAC-GACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCAT 2235933 Query 79307 CCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGT 79366 | || ||||| |||| ||||| || ||| || | | |||| ||| || | | Sbjct 2235932 CGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCAT 2235873 Query 79367 CCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGC 79426 || || ||| | | |||||| || || |||||||| || |||| ||| || || | | Sbjct 2235872 TCTGTTCGACCCTTTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGG 2235813 Query 79427 AACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGT 79486 | || ||||| | || |||||| ||| | || | |||| | | |||||| || | Sbjct 2235812 CTCTGATTTCCTCTTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCAT 2235753 Query 79487 GCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGT 79546 |||| || |||| || | || || | ||| ||||||| || || || | || | Sbjct 2235752 GCCATGGTTCCAAGTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACAT 2235693 Query 79547 ACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACG--CCGTT 79604 | || || |||||||||||||||| | ||| || | || |||| ||| | ||||| Sbjct 2235692 AACGAGCGGTGTTGTTGAAAACTCTCACCATTGGAATAATACCGT--TCGAAGTACCGTT 2235635 Query 79605 CGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCC 79664 || || || | || | || ||||| || ||| | || || || || Sbjct 2235634 AGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACC 2235575 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 | ||||| || || || ||||| | || || || || || || |||||||| Sbjct 2235574 AGCAGTTTTGGAAATTAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTC 2235515 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 ||| ||| || || | ||| || |||||| ||||||| ||||| ||||| || Sbjct 2235514 ATCCCGCATGGCAACTAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAA 2235455 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 || || || | ||||| ||||| |||| || ||||| | | ||| || || | || Sbjct 2235454 CAGAGTAGGAGAGGCGTGAGTGAAATACTTCTGACTCATAAAGTTGTAGGTTTCAATAAC 2235395 Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 | | | ||| || || || || |||| ||||| ||||| Sbjct 2235394 CCTTGCAATGTCATCACCATGAATACCGATAGCGACACGCAT 2235353 >seq2 Length=2687137 Score = 93.3 bits (102), Expect = 5e-14 Identities = 203/296 (69%), Gaps = 15/296 (5%) Strand=Plus/Minus Query 59826 ATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGA---- 59881 ||||||||||| || ||||| | |||| |||| | |||| ||||| |||| Sbjct 443317 ATCCACTCCGAAACTTACTCATTGTTGATTGATACTTACATCAAAGATCCAAAAGAATCC 443258 Query 59882 GAAGGCTGGTCTGTTCCGTGCCATAGAGA-CGTCCCCCGCAGTTAAACAAAAAGCAGAAT 59940 ||| || ||||| |||||| |||| | | || | | | ||| |||| || || | Sbjct 443257 GAATTCT----TGTTCAATGCCATCGAGACCATTCCATGTA-TCAAAGAAAAGGCTGACT 443203 Query 59941 GGGCCATGCAGTGGATGAGTCCTG--GA-GCATCATTTGCACAACGTCTCATAGCTTTTG 59997 |||||||| ||||| || || || | || || ||||| | | || || | Sbjct 443202 GGGCCATGAGATGGATTGCCGATGACGATGCTTTGTTCGCTGAACGTTTGGTTGCCTTCG 443143 Query 59998 CATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAG 60056 | ||| || ||||| |||||||| || ||||| ||| | |||| |||||| | |||||| Sbjct 443142 C-TGCTGTTGAAGGTATCTTCTTTTCGGGCTCTTTCGCTTCTATCTTCTGGTTGAAAAAG 443084 Query 60057 CGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112 | || || ||||| || ||| |||||||| ||||| |||| | | || || || Sbjct 443083 AGAGGTCTTATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGATGAAGG 443028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524724577840