Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 143 3e-29
seq2 93.3 5e-14
>seq1
Length=3325186
Score = 143 bits (158), Expect = 3e-29
Identities = 1071/1722 (62%), Gaps = 29/1722 (2%)
Strand=Plus/Minus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|| |||| |||||||| || ||||| | || |||||||| || || | |||||| ||
Sbjct 2237070 GTACGCAGGTAGTACATACCAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTG 2237011
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| || || ||| | | || | || | ||||| | |||||| || ||||||||
Sbjct 2237010 GTCAATTTACCCATAGTTGGAGACATCAGGTGAATGTTCAACGACTGAGATTGGTCGATA 2236951
Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369
|| || | ||| || ||||| || |||| | |||||| | |||||||| | |||
Sbjct 2236950 TAGGCTGATCTGTCCGCAGCCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTC 2236891
Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGC---TTGTACGCTCCCACCGGCT 78426
|||| | | || || | || | |||| || ||| | | || | ||
Sbjct 2236890 TTATAAAGGCCTTTGAGTTGCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCT 2236831
Query 78427 CGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGGACC 78486
| || | ||| || || | | || ||| || | | | ||||| || |
Sbjct 2236830 GAAATGATATGATTTTTCATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAAT 2236771
Query 78487 AGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTC 78546
| || | |||| || ||| || || || | || || ||||||||| |
Sbjct 2236770 AAGTAAGGATTAACAATTTGGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAA 2236711
Query 78547 GTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATG 78606
|| || || |||||| |||||||| |||| ||||||| || || || || |||||
Sbjct 2236710 GTATAAGGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATA 2236651
Query 78607 GGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------ 78660
||||| || || || || || | |||||| || | |||| | | || ||
Sbjct 2236650 GGTGCAACTAGAAGCGAGTTTCTAAGACCTGTCGAAATAATCTTGGCTTTGAGTGACTCC 2236591
Query 78661 CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGAC 78720
| ||||| | ||| | | | |||||| || || | ||||||| ||
Sbjct 2236590 CATTCCCACAGCTCAGAGGGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGAT 2236531
Query 78721 GCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCG 78780
|| || || || | || || ||||||| ||| ||||| ||| | ||||| || |
Sbjct 2236530 GCTGGAGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCT 2236471
Query 78781 AGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTC 78840
|| ||| | ||||| | || ||||| || | || || | |||| |
Sbjct 2236470 TCCAAGGCTCCATGGTAGATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGA 2236411
Query 78841 TCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCG 78900
|| || | | | | | ||||||| |||| || | || || || || | |||
Sbjct 2236410 GAATCAAATGGGATTCTCAACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCA 2236351
Query 78901 ATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCG 78960
|| |||| | ||||||||| | | ||| | |||||| |||| | |||
Sbjct 2236350 ATTGGTCTATTACGCATGTTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCG 2236291
Query 78961 ATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAAT-- 79018
|| | | ||||| |||||| ||||| ||| || | || | || || | || |
Sbjct 2236290 ATAATTCTGTTCAAGTTACGAGTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTG 2236231
Query 79019 ---CAAAA-TGATTTCC-----TTTGATGAAAGTC-GGTAG-GCACAGCGATGCCAGGTT 79067
||| | ||| | | ||| | |||| | || || ||| | || |||| |||
Sbjct 2236230 TACCAACAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA-ATAGAAGCCAAGTT 2236172
Query 79068 GCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGA 79127
|| || || || || || ||| |||| ||| | || || || | ||||| ||
Sbjct 2236171 ACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGA 2236112
Query 79128 CTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACAT 79187
|| ||| || | ||||||||||||| | |||| |||||| || ||||| || ||||
Sbjct 2236111 TTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACAT 2236052
Query 79188 GTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCG 79247
| | || || ||||| || ||| || ||| | | ||| ||| | | ||||
Sbjct 2236051 GAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTT 2235992
Query 79248 GACAACCT-TCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCT 79306
|| | |||| || |||| | |||| | ||||| || | || | |
Sbjct 2235991 GATGGTTTGTCTTCCAC-GACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCAT 2235933
Query 79307 CCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGT 79366
| || ||||| |||| ||||| || ||| || | | |||| ||| || | |
Sbjct 2235932 CGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCAT 2235873
Query 79367 CCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGC 79426
|| || ||| | | |||||| || || |||||||| || |||| ||| || || | |
Sbjct 2235872 TCTGTTCGACCCTTTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGG 2235813
Query 79427 AACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGT 79486
| || ||||| | || |||||| ||| | || | |||| | | |||||| || |
Sbjct 2235812 CTCTGATTTCCTCTTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCAT 2235753
Query 79487 GCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGT 79546
|||| || |||| || | || || | ||| ||||||| || || || | || |
Sbjct 2235752 GCCATGGTTCCAAGTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACAT 2235693
Query 79547 ACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACG--CCGTT 79604
| || || |||||||||||||||| | ||| || | || |||| ||| | |||||
Sbjct 2235692 AACGAGCGGTGTTGTTGAAAACTCTCACCATTGGAATAATACCGT--TCGAAGTACCGTT 2235635
Query 79605 CGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCC 79664
|| || || | || | || ||||| || ||| | || || || ||
Sbjct 2235634 AGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACC 2235575
Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724
| ||||| || || || ||||| | || || || || || || ||||||||
Sbjct 2235574 AGCAGTTTTGGAAATTAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTC 2235515
Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784
||| ||| || || | ||| || |||||| ||||||| ||||| ||||| ||
Sbjct 2235514 ATCCCGCATGGCAACTAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAA 2235455
Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844
|| || || | ||||| ||||| |||| || ||||| | | ||| || || | ||
Sbjct 2235454 CAGAGTAGGAGAGGCGTGAGTGAAATACTTCTGACTCATAAAGTTGTAGGTTTCAATAAC 2235395
Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886
| | | ||| || || || || |||| ||||| |||||
Sbjct 2235394 CCTTGCAATGTCATCACCATGAATACCGATAGCGACACGCAT 2235353
>seq2
Length=2687137
Score = 93.3 bits (102), Expect = 5e-14
Identities = 203/296 (69%), Gaps = 15/296 (5%)
Strand=Plus/Minus
Query 59826 ATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGA---- 59881
||||||||||| || ||||| | |||| |||| | |||| ||||| ||||
Sbjct 443317 ATCCACTCCGAAACTTACTCATTGTTGATTGATACTTACATCAAAGATCCAAAAGAATCC 443258
Query 59882 GAAGGCTGGTCTGTTCCGTGCCATAGAGA-CGTCCCCCGCAGTTAAACAAAAAGCAGAAT 59940
||| || ||||| |||||| |||| | | || | | | ||| |||| || || |
Sbjct 443257 GAATTCT----TGTTCAATGCCATCGAGACCATTCCATGTA-TCAAAGAAAAGGCTGACT 443203
Query 59941 GGGCCATGCAGTGGATGAGTCCTG--GA-GCATCATTTGCACAACGTCTCATAGCTTTTG 59997
|||||||| ||||| || || || | || || ||||| | | || || |
Sbjct 443202 GGGCCATGAGATGGATTGCCGATGACGATGCTTTGTTCGCTGAACGTTTGGTTGCCTTCG 443143
Query 59998 CATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAG 60056
| ||| || ||||| |||||||| || ||||| ||| | |||| |||||| | ||||||
Sbjct 443142 C-TGCTGTTGAAGGTATCTTCTTTTCGGGCTCTTTCGCTTCTATCTTCTGGTTGAAAAAG 443084
Query 60057 CGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112
| || || ||||| || ||| |||||||| ||||| |||| | | || || ||
Sbjct 443083 AGAGGTCTTATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGATGAAGG 443028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524724577840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |