Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq4 179 4e-40
seq3 159 4e-34
seq2 127 2e-24
seq1 120 3e-22
>seq4
Length=1577441
Score = 179 bits (198), Expect = 4e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | ||||||||||||||||| || ||||| ||||||
Sbjct 1239933 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACTATTACCCTCGAGGTGGAGTCATCA 1239874
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| |||| |||||||||||||| || |||||||| || |||
Sbjct 1239873 GACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAG 1239814
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| |||| ||||| ||||||||| | || || | | || || | ||||||||
Sbjct 1239813 CAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAAC 1239754
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617
| |||||||||||||||||||| |||| ||
Sbjct 1239753 ATTCAAAAGGAATCCACTCTTCACTTAGTTTT 1239722
Score = 178 bits (196), Expect = 1e-39
Identities = 161/203 (79%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | ||||||||||||||||| || ||||| ||||||
Sbjct 1240161 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACTATTACCCTCGAGGTGGAGTCATCA 1240102
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| |||| |||||||||||||| || |||||||| || |||
Sbjct 1240101 GACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAG 1240042
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| |||| ||||| ||||||||| | || || | | || || | ||||||||
Sbjct 1240041 CAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAAC 1239982
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||||||||||||
Sbjct 1239981 ATTCAAAAGGAATCCACTCTTCA 1239959
Score = 178 bits (196), Expect = 1e-39
Identities = 161/203 (79%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | ||||||||||||||||| || ||||| ||||||
Sbjct 1240389 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACTATTACCCTCGAGGTGGAGTCATCA 1240330
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| |||| |||||||||||||| || |||||||| || |||
Sbjct 1240329 GACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAG 1240270
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| |||| ||||| ||||||||| | || || | | || || | ||||||||
Sbjct 1240269 CAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAAC 1240210
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||||||||||||
Sbjct 1240209 ATTCAAAAGGAATCCACTCTTCA 1240187
Score = 165 bits (182), Expect = 9e-36
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||| || || || || || |||||||| ||||||||||| ||||||
Sbjct 1240618 AATGCAGATTTTTGTGAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCATC 1240559
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||||| || | ||| |||| |||||||||||||| || |||||||| || ||
Sbjct 1240558 AGACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCA 1240499
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||| ||| |||| ||||| ||||||||| | || || | | || || | ||||||||
Sbjct 1240498 GCAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAA 1240439
Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||||||||||||
Sbjct 1240438 CATTCAAAAGGAATCCACTCTTCA 1240415
>seq3
Length=1828518
Score = 159 bits (176), Expect = 4e-34
Identities = 154/198 (78%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || || ||||| |||||||| |||||||| || | ||||| |||||
Sbjct 868735 AATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 868794
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| || | ||| | || |||||||||||||||||||||||||| |||||
Sbjct 868795 CGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCA 868854
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||||| || ||||||||||||||| | ||||||| | | || | | ||||| ||
Sbjct 868855 ACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAA 868914
Query 27585 TGTCCAAAAGGAATCCAC 27602
|||||||||| || ||
Sbjct 868915 CATCCAAAAGGAGTCTAC 868932
>seq2
Length=2687137
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || |||||||| | ||||| ||||| ||||| | || || |||||
Sbjct 1170121 AATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCCTC 1170062
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | || | ||| | || ||||| |||||||| ||||||||||| |||||
Sbjct 1170061 CGACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGACCA 1170002
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||| | |||||||||||||||||| | || || | | | || || | ||||| ||
Sbjct 1170001 ACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTGTCCGACTACAA 1169942
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| || ||| | || || ||
Sbjct 1169941 CATCCAGAAGGAGTCTACTTTGCACCTGGT 1169912
>seq1
Length=3325186
Score = 120 bits (132), Expect = 3e-22
Identities = 667/1056 (63%), Gaps = 51/1056 (5%)
Strand=Plus/Minus
Query 80714 TCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCG 80773
||||||| | ||||| | || ||||| || | || || || | | ||| |||| |
Sbjct 2236388 TCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGG 2236329
Query 80774 ATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTG 80833
||| | ||||| |||| ||||| |||| | ||||| | | ||||| ||| || |
Sbjct 2236328 ATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGAG 2236269
Query 80834 TAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT------TG-GT----TCCC 80882
| || ||| || | ||||| || || | ||||| | | || || ||
Sbjct 2236268 TGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTATCATCGG 2236209
Query 80883 CTTCA-CAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT 80941
|||| |||| || ||||| | || |||| || || || || ||||| |
Sbjct 2236208 TTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCTGGGG 2236149
Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001
| | |||| || || || || | ||||| || ||||| ||||| ||| ||||
Sbjct 2236148 AAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCT 2236089
Query 81002 GGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCT 81061
|||| | || ||| ||||| ||||| || ||||| | || |||||||| || ||
Sbjct 2236088 GGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTCTGTCT 2236029
Query 81062 GTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTT 81121
||| || ||||||||||| ||||| || | || |||| || |||| |||
Sbjct 2236028 GTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT--------GG--TTTGTCTT 2235979
Query 81122 CGGCCACATAC---TTGG-------CGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCA 81171
| | || | | || | |||| ||| || || | | |||| | ||
Sbjct 2235978 CCACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCG 2235919
Query 81172 GTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCC 81231
| ||| | || ||| | || | | |||| ||| ||| | |||| | | ||
Sbjct 2235918 GCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGC---CATTCTGTTCGACC 2235862
Query 81232 ---TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCC 81288
|||||||| ||||||||||| || || | ||| || || | | | |||
Sbjct 2235861 CTTTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCC 2235802
Query 81289 TCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCC 81348
|| | || ||||| || | || | |||| | | |||||||||||||||||| |||
Sbjct 2235801 TCTTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCC 2235742
Query 81349 AGATACACGGCGATCGACCCCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTC 81405
| |||| || | | || ||| | ||||| || | || ||||| || ||
Sbjct 2235741 AAGTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTG 2235682
Query 81406 GCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATA 81465
||| || || | || ||| || || ||||| | || |||||| ||||| | ||
Sbjct 2235681 TTGTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATG 2235622
Query 81466 CGCGACCCCTTGGCGCGCACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTT-- 81522
|| || |||| || | || || || || ||| || ||||| | || |||
Sbjct 2235621 TAGGATCCTGTGGCACGAATATTATGAATGTGCAA-ACCAATTCCACCAG--CAGTTTTG 2235565
Query 81523 GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATG 81582
||||| |||||| |||| || |||||||| || || || || | ||||
Sbjct 2235564 GAAATTAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATG 2235505
Query 81583 TCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGG 81642
||| |||||||| ||||| || ||| | || || || ||||| || ||
Sbjct 2235504 GCAACTAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGA 2235445
Query 81643 GTCGCGTGAATGAAATAACGGTTTGAC--ATCAGGTCATAGGTTTCCTTGACGCGTGGAA 81700
| |||||| ||||||| | |||| || | || |||||||| | || | || ||
Sbjct 2235444 GAGGCGTGAGTGAAATACT--TCTGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAA 2235387
Query 81701 TATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736
| || ||||| |||||||||||||| ||||||||||
Sbjct 2235386 TGTCATCACCATGAATACCGATAGCGACACGCATAA 2235351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310321582320
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