Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 3e-20
seq2 105 5e-18
>seq4
Length=1577441
Score = 113 bits (124), Expect = 3e-20
Identities = 145/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||||||||| || |||||||| || || || || |||||||| || || || ||
Sbjct 1240620 AAAATGCAGATTTTTGTGAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCA 1240561
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| |||| | | || || ||| ||||| |||||| | || || |||
Sbjct 1240560 TCAGACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGAT 1240501
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || |||||||| ||||| || || ||| ||||||||| | ||| | || ||
Sbjct 1240500 CAGCAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTAT 1240441
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| ||||| || |||||
Sbjct 1240440 AACATTCAAAAGGAATCCAC 1240421
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || ||| | || || || || || || ||||| || || || |
Sbjct 1239933 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACTATTACCCTCGAGGTGGAGTCATCA 1239874
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || ||| ||||| |||||| | || || |||||
Sbjct 1239873 GACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAG 1239814
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| |||||||| ||||| || || ||| ||||||||| | ||| | || || |||
Sbjct 1239813 CAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAAC 1239754
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| ||||| || ||||| | || ||||||||||| ||| | || ||
Sbjct 1239753 ATTCAAAAGGAATCCACTCTTCACTTAGTTTTAAGATTGAGGGGTGG 1239707
>seq2
Length=2687137
Score = 105 bits (116), Expect = 5e-18
Identities = 165/235 (70%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| || ||| | || || || || || || | ||||| || |||
Sbjct 1170123 AAAATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCC 1170064
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | || | | || || ||| ||||| ||||| | || || ||
Sbjct 1170063 TCCGACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGAC 1170004
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
||||| ||||| || ||||| || || ||| ||||||||| | ||| | ||| |||
Sbjct 1170003 CAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTGTCCGACTAC 1169944
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841
||||| || || ||||| || || || | ||| | || ||| |||| || ||||
Sbjct 1169943 AACATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGGTGGTATCA 1169889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009554685588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |