Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq2 228 7e-55
>seq2
Length=2687137
Score = 228 bits (252), Expect = 7e-55
Identities = 570/862 (66%), Gaps = 13/862 (2%)
Strand=Plus/Plus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|||||||| || || |||| |||||||||||| || || || || | || ||||| ||
Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
||||| |||||||| ||||| || ||||||| ||||| |||||||| ||
Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436
| || ||||| || || || | |||||||| ||| | |||||| ||||| | ||
Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895
Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496
||||| || || | ||| || | || ||| || || || ||||| || ||
Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATC 442955
Query 4497 TCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAA 4556
| || | | || | | | | | || |||| || | || || |||||
Sbjct 442956 TTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAG 443015
Query 4557 TCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATT 4616
|| || || ||||| ||||||| ||| || || || || || || || || |||||
Sbjct 443016 TCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATA 443075
Query 4617 AAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCT 4676
| |||||||||||| | ||| || |||| || || || || |||||||| || |||||
Sbjct 443076 AGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCA 443135
Query 4677 ACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTT---TAATCCAT 4733
|| || || || || || || || ||||| | || | ||| | |||||||
Sbjct 443136 ACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAA---AGCATCGTCATCGGCAATCCAT 443192
Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAAT 4793
| | ||||||| ||| |||| || | || ||||| || | || || || || ||
Sbjct 443193 CTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAA- 443251
Query 4794 TTACTT--TTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAG 4851
| || ||| ||| |||| || ||||| || || | | || |||| |
Sbjct 443252 -GAATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGG 443310
Query 4852 AATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAA 4911
| || || || || || || ||||| |||||||| ||| | ||||| | | |||||
Sbjct 443311 AGTGGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAA 443370
Query 4912 CTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAA 4971
| || | || |||| || || ||||| || || ||||| ||| ||| |||||||
Sbjct 443371 CCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAA 443430
Query 4972 ACGCCAAAACATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGTTTTTTCCAGTGGG 5028
| || | ||| ||| ||||| |||| || ||| | || | || |||||||
Sbjct 443431 AGGCAAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCAT 443490
Query 5029 GCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGT 5088
||||||| || || || | ||| || |||||||||| || ||||| || | |||||
Sbjct 443491 GCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGT 443550
Query 5089 ACATAGACCAAATATCAGGATA 5110
|||| ||| || || ||||
Sbjct 443551 ACATTTGCCAGATGTCGTGATA 443572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049542748663
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |