Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 410 2e-109 seq2 185 1e-41 >seq1 Length=3325186 Score = 410 bits (454), Expect = 2e-109 Identities = 1347/2078 (65%), Gaps = 49/2078 (2%) Strand=Plus/Minus Query 76772 CTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACC 76831 ||| || | |||||||||||| | || || || | || ||||| || ||||||||||| Sbjct 2237110 CTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATACC 2237051 Query 76832 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891 ||| |||| || |||| || ||||| |||||||| |||| ||| | | || Sbjct 2237050 AGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTGG 2236991 Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 76951 | | ||||| |||| ||||||| ||| ||||| | ||| ||| || || || Sbjct 2236990 AGACATCAGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCAGC 2236931 Query 76952 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 77011 ||| | || || |||||||||| || ||||||| || || ||| ||||| | Sbjct 2236930 CATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGTTG 2236871 Query 77012 ATCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTAT 77068 || |||| ||| | |||||||||||| || ||||| || || ||| || || Sbjct 2236870 CTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTCAT 2236811 Query 77069 ATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128 | ||| | ||| | | || || | | | | | | ||||||||| ||||| Sbjct 2236810 GTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTTG 2236751 Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 |||||||||| ||||| | ||| | ||| || ||| ||||| ||||| | | | || Sbjct 2236750 GAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACTC 2236691 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA-T 77247 |||| |||||||| || | ||| |||||||| ||||||||||| || | || | | | Sbjct 2236690 GTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAG-AAGCGAGT 2236632 Query 77248 TTCTGAGACCATGT-GTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAA 77306 |||| ||||| ||| | | || || |||| || | | ||| ||||| || || || Sbjct 2236631 TTCTAAGACC-TGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGAG 2236573 Query 77307 GGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATAT 77366 || ||||| | ||| || || | ||| || | | || || || | | | Sbjct 2236572 GGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAG 2236513 Query 77367 GTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAA 77426 ||||| |||| |||||| | |||| ||| | |||||||| ||||| | || Sbjct 2236512 GTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTAG 2236453 Query 77427 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGT 77486 || ||||||||||||| |||| || | | || || | |||||| || | | | Sbjct 2236452 ATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGG-ATTCT 2236394 Query 77487 AAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545 || || || ||||| ||||| || ||||| |||| | |||| ||||||| | | | Sbjct 2236393 CAACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCAT 2236334 Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 ||||| | |||| ||||||| || || || || |||| |||||| | || | || Sbjct 2236333 GTTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTT 2236274 Query 77606 TCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT-----CAA--------ATC 77652 | | || || || | ||| | || || ||| | ||| ||| Sbjct 2236273 ACGAGTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTATC 2236214 Query 77653 TTCCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712 || | | |||||| | ||| ||||| || | ||||| || || || | Sbjct 2236213 ATCGGTTTC-AACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTT 2236155 Query 77713 TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGAT 77772 | | | ||| | | ||||| ||| || ||| |||| || |||| | Sbjct 2236154 CTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGT 2236095 Query 77773 TTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTT 77832 | | |||||| | || || || || | |||||||| | || || ||||| ||||||| Sbjct 2236094 TCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGTTT 2236035 Query 77833 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTAT- 77891 | |||||| |||| || | | ||| | | ||||| || | ||||| | Sbjct 2236034 CTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTT 2235979 Query 77892 ---CGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCA 77948 || | || |||| ||| || || |||||||||||| || | || || Sbjct 2235978 CCACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCG 2235919 Query 77949 TCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGT 78008 | | ||||| ||| |||| | | || | ||| || |||| | | || | | Sbjct 2235918 GCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTT 2235859 Query 78009 TTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCA 78068 ||||| || |||||||| ||||||||||| |||||||||| || ||| ||| || Sbjct 2235858 TTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTCT 2235799 Query 78069 TTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 78128 ||||| ||||| || || | ||| | | || || | |||||||||||| | Sbjct 2235798 TTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAG 2235739 Query 78129 TATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTA 78188 || | || | | ||||| || || ||||| || ||||| | ||| | |||||||| Sbjct 2235738 TACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTG 2235679 Query 78189 TTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 || ||||||||| |||||||||||||||||| || || || || || |||| ||| || Sbjct 2235678 TTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAG 2235619 Query 78249 CTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATT 78308 ||| | || ||||||||| |||| | || ||||| || || | || || ||| Sbjct 2235618 GATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATT 2235559 Query 78309 AGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGA 78368 | ||| || ||||| ||||| || ||||| || || ||||||| |||| || Sbjct 2235558 AAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACT 2235499 Query 78369 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428 | ||||| |||||||| | ||| || || || ||||| | || ||||| || Sbjct 2235498 AAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCG 2235439 Query 78429 TGCGTAAACCATTT----TTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC 78484 || || || | || ||| |||| ||||| ||||||||| | | | ||||| Sbjct 2235438 TGAGTGAAATACTTCTGACTCATAAAG----TTGTAGGTTTCAATAACCCTTGCAATGTC 2235383 Query 78485 CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTT 78544 |||||| || | || |||||||| | | || ||||| | ||| | || Sbjct 2235382 ATCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACATT 2235323 Query 78545 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TG 78603 ||| ||| ||| | ||| ||| ||||||| || || || ||||| || || || || Sbjct 2235322 GCCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACTG 2235263 Query 78604 AAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATAT 78663 |||| ||||| ||||| | |||| |||| || || | ||| || ||| |||||| | Sbjct 2235262 AAAA-TCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGAACAATGT 2235204 Query 78664 CCATGACAGTAGT----TGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAG 78719 || ||| || |||| | |||||| | || || || || || | || Sbjct 2235203 ---TGTAAGT-GTCCTCAGAAACTAAAGGAGAGTGCTTCCCGTTCTTTGGGTTGATGTAT 2235148 Query 78720 TTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGAT 78779 | | | || |||| | || | | || | || | || | ||||||| ||| || Sbjct 2235147 TCATACAACTCTTTGGTCACCTGAGAGTATTGCTTAGTAGTCTGTTTGTGTAAATTGGAA 2235088 Query 78780 ACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 ||||| |||||||| || | ||| |||||||| ||||| Sbjct 2235087 ACAGCAATTCTTGCTGCCAAAATGGCATAATCGGGATG 2235050 >seq2 Length=2687137 Score = 185 bits (204), Expect = 1e-41 Identities = 559/854 (65%), Gaps = 12/854 (1%) Strand=Plus/Plus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || ||| || | || ||||| || || || || || |||| || || || Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| |||||||||||||| | || || | |||||| || | || | Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 |||||||| |||||||| || | ||| ||||| || |||||||| | | Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895 Query 48030 TTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 ||| || ||||| || || ||| | || || ||| || |||||| || || || Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTT-TTCAATCTCGACAGCCTCTGTAATAAT 442954 Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAA 48148 | | || |||||||||| | | | ||| || || | || || ||||| Sbjct 442955 CTTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAA 443014 Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208 || || | ||||||||||| | ||| | || || || || || | ||| ||||| Sbjct 443015 GTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 443074 Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 48268 || || | ||||| | ||| || || | |||||||| || |||||||| || ||||| Sbjct 443075 AAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTC 443134 Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACCG 48325 || || || || || | | || || | || |||| | ||||| | Sbjct 443135 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCT 443194 Query 48326 TTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 48384 ||||| |||||||| |||||| | ||| || || || || || ||||| || | | Sbjct 443195 CATGGCCCAGTCAGCCTT-TTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGA 443253 Query 48385 AGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGT 48444 | | ||| || |||||| | ||||||||| || || | || ||||||||| Sbjct 443254 ATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGT 443313 Query 48445 GAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCT 48504 | || || || || || ||||| |||||||||||| | ||||| | | || |||| Sbjct 443314 GGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCT 443373 Query 48505 CCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATG 48564 | | | || ||| ||||||| ||||| || || |||||| ||||||||||| | Sbjct 443374 CAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGG 443433 Query 48565 CTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTG 48620 | || | | | | |||||||| || || ||| ||| | ||||||||||||| Sbjct 443434 C-AAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCATGC 443492 Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATAC 48680 | ||| ||| | |||| ||| || || |||||||| || || || || | ||| ||| Sbjct 443493 AAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTAC 443552 Query 48681 ATATTCCATATATC 48694 || | ||| || || Sbjct 443553 ATTTGCCAGATGTC 443566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668704483040