Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1 392 5e-104
seq2 237 2e-57
>seq1
Length=3325186
Score = 392 bits (434), Expect = 5e-104
Identities = 1239/1895 (65%), Gaps = 54/1895 (3%)
Strand=Plus/Minus
Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431
|||| || |||||||||| || | || | || ||||| || |||||||||||||| |
Sbjct 2237105 CAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATACCAGTCT 2237046
Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491
||| || |||| || ||||| |||||||| || | ||| | | |||
Sbjct 2237045 TTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTGGAGACA 2236986
Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551
| ||||| |||| ||||||| ||| ||||| | ||| ||| || || ||||| |
Sbjct 2236985 TCAGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCAGCCATAT 2236926
Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611
|| || |||||||||| || ||||||| || || ||| ||||| | || |
Sbjct 2236925 CAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGTTGCTCAG 2236866
Query 75612 GAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668
||| || | |||||||||||| ||| || || || || ||| || || | ||
Sbjct 2236865 GAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTCATGTTAT 2236806
Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728
| | ||| | || || | | | | | | ||||||||||||||| ||||
Sbjct 2236805 CGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTTGGAATT 2236746
Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788
|||||| ||||| | || | ||| || ||| ||||| ||||| | | | || ||||
Sbjct 2236745 CTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACTCGTTGT 2236686
Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA-TTTCTG 75847
|||||||| || | |||||||||||| ||||||||||| || | || | | |||||
Sbjct 2236685 AACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAG-AAGCGAGTTTCTA 2236627
Query 75848 AGACCATGT-GTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTAC 75906
||||| ||| | | || || |||| || | | ||| ||||| || || || ||
Sbjct 2236626 AGACC-TGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGAGGGCTT 2236568
Query 75907 AACATCCCAGAGATCGTATTGTAGAATTCCGT----TGCTAGCATATGATCCATTATATG 75962
||||| | ||| || || | ||| || | |||| | || || | | | |
Sbjct 2236567 TTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGA----GAACCTTGAAAGG 2236512
Query 75963 TTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAA 76022
||||||||| || |||| | |||| ||||| || || || || || | || |
Sbjct 2236511 TTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTAGA 2236452
Query 76023 TTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTA 76082
| ||||||||||||| ||||||| | | || || || |||||| || | | |
Sbjct 2236451 TAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGG-ATTCTC 2236393
Query 76083 AAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 76141
|| || || ||||| |||| || ||||| |||| | |||| ||||||| | | |
Sbjct 2236392 AACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATG 2236333
Query 76142 TTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201
||||| | ||| ||||||| ||||| || || | || |||||| | || | ||
Sbjct 2236332 TTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTA 2236273
Query 76202 CTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CAA-ATT---TTCCA 76252
| || || || | ||| | || || ||| | ||| | | | ||
Sbjct 2236272 CGAGTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTATCA 2236213
Query 76253 TC--TATCA-CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTA 76309
|| | ||| |||| |||||| ||||| || | ||||| || || || |
Sbjct 2236212 TCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCT 2236153
Query 76310 GCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGAT-AGTTCCAAGATT 76368
| | ||| | | ||||| || || ||| | || || | ||||| |
Sbjct 2236152 GGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTC 2236093
Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428
|| | ||||| | || |||||||| | |||||||| | | || ||||| || |||||
Sbjct 2236092 TTCT-GGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTC 2236034
Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTAT-- 76486
|||||| |||| || | | ||| | | ||||| || | ||||| |
Sbjct 2236033 TGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTC 2235978
Query 76487 --CG--CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATC 76542
|| |||| || |||| ||| | || | |||||||||||| || | || ||
Sbjct 2235977 CACGACCTTC-CT-TTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTC 2235920
Query 76543 ATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCG 76602
| | |||||| ||| | ||| | | || | ||| || |||| | | ||||
Sbjct 2235919 GGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCT 2235860
Query 76603 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662
|||||| || |||||||| ||||||||||| |||||||||| || ||| ||| ||
Sbjct 2235859 TTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTC 2235800
Query 76663 ATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAG 76722
||||| ||||| || || | || | | || || | |||||||||||| |
Sbjct 2235799 TTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAA 2235740
Query 76723 ATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTT 76782
|| | || | |||| || || || ||||| || ||||| | ||| | || |||||
Sbjct 2235739 GTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTT 2235680
Query 76783 ATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATA 76842
|| ||||||||| |||||||||||| ||||| || ||||| || || |||| ||| ||
Sbjct 2235679 GTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTA 2235620
Query 76843 ACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGAT 76902
||| |||||||||||| ||| | || ||||| || || |||| || ||
Sbjct 2235619 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAAT 2235560
Query 76903 TAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 76962
|| |||||| ||||| || ||||| || || || || |||||| |||| ||
Sbjct 2235559 TAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAAC 2235500
Query 76963 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGC 77022
| ||||| |||||||| | ||| || || || ||||||| |||||||| ||
Sbjct 2235499 TAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 2235440
Query 77023 ATGAGTGAACCATTTTT----CAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT 77078
|||||||| | || | || ||||| |||| ||||||||||| | | || |
Sbjct 2235439 GTGAGTGAAATACTTCTGACTCATAAAGT----TGTAGGTTTCAATAACCCTTGCAATGT 2235384
Query 77079 CCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCT 77138
| |||||| || | |||||||||||| | | || ||||| |||||| || |
Sbjct 2235383 CATCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACAT 2235324
Query 77139 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 77197
| ||| ||| ||| | ||| ||| ||||||| || || || ||||| || || || |
Sbjct 2235323 TGCCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACT 2235264
Query 77198 GAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232
||||| ||||| ||||| | |||| | || || ||
Sbjct 2235263 GAAAA-TCTCTATCGTAGACAATAGCAGAGTTCAG 2235230
>seq2
Length=2687137
Score = 237 bits (262), Expect = 2e-57
Identities = 573/861 (67%), Gaps = 10/861 (1%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|||||||| ||| || | || ||||| || || || || || |||| || || ||
Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| |||||||| ||||| || || || || | |||||| || | || |
Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|||||||| |||||||| || | |||| ||||| || |||||||| | |
Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895
Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577
|| || ||||| || || ||| | || || |||||| |||||| || | || ||
Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTT-TTCAATCTCGACAGCCTCTGTAATAAT 442954
Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| | || |||||||||| | | | |||| || || | || || |||||
Sbjct 442955 CTTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAA 443014
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
|| || | ||||||||||| | ||| | || || || || || | || |||||
Sbjct 443015 GTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 443074
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
|| || | |||||| | ||| || |||| |||||||| || |||||||| || |||||
Sbjct 443075 AAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTC 443134
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCT 46814
||||| ||||| || || | | || || | ||||| | || |||||| ||
Sbjct 443135 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCT 443194
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
||||| |||||||||| || | ||| || || || || || ||||| || | ||
Sbjct 443195 CATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAA 443254
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
| ||| | |||||| | || ||||| || || | || |||| || ||
Sbjct 443255 TTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTG 443314
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
||||| || || || ||||| |||||||||||| ||||||| | || || |||||
Sbjct 443315 GATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTC 443374
Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054
| | || ||| |||||| ||||| || || |||||| ||||||||||| |
Sbjct 443375 AGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAA-GG 443433
Query 47055 CAATACATGTTTA-ATAAAATATTTTTCA---TCGGTAGTCAGTTTATTCCAGTCATTGA 47110
||| | | | | |||||||| || ||| ||| | | | ||||||||||||| |
Sbjct 443434 CAAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCATGCA 443493
Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACA 47170
||| ||| | |||| ||| || || ||||| || || || || || | ||| ||||
Sbjct 443494 AATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACA 443553
Query 47171 TATTCCATATATCACGATATT 47191
| | ||| || || ||||||
Sbjct 443554 TTTGCCAGATGTCGTGATATT 443574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934301971520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |