Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 392 5e-104 seq2 237 2e-57 >seq1 Length=3325186 Score = 392 bits (434), Expect = 5e-104 Identities = 1239/1895 (65%), Gaps = 54/1895 (3%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| || |||||||||| || | || | || ||||| || |||||||||||||| | Sbjct 2237105 CAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATACCAGTCT 2237046 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 ||| || |||| || ||||| |||||||| || | ||| | | ||| Sbjct 2237045 TTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTGGAGACA 2236986 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 | ||||| |||| ||||||| ||| ||||| | ||| ||| || || ||||| | Sbjct 2236985 TCAGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCAGCCATAT 2236926 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 || || |||||||||| || ||||||| || || ||| ||||| | || | Sbjct 2236925 CAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGTTGCTCAG 2236866 Query 75612 GAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 ||| || | |||||||||||| ||| || || || || ||| || || | || Sbjct 2236865 GAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTCATGTTAT 2236806 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 | | ||| | || || | | | | | | ||||||||||||||| |||| Sbjct 2236805 CGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTTGGAATT 2236746 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 |||||| ||||| | || | ||| || ||| ||||| ||||| | | | || |||| Sbjct 2236745 CTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACTCGTTGT 2236686 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA-TTTCTG 75847 |||||||| || | |||||||||||| ||||||||||| || | || | | ||||| Sbjct 2236685 AACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAG-AAGCGAGTTTCTA 2236627 Query 75848 AGACCATGT-GTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTAC 75906 ||||| ||| | | || || |||| || | | ||| ||||| || || || || Sbjct 2236626 AGACC-TGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGAGGGCTT 2236568 Query 75907 AACATCCCAGAGATCGTATTGTAGAATTCCGT----TGCTAGCATATGATCCATTATATG 75962 ||||| | ||| || || | ||| || | |||| | || || | | | | Sbjct 2236567 TTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGA----GAACCTTGAAAGG 2236512 Query 75963 TTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAA 76022 ||||||||| || |||| | |||| ||||| || || || || || | || | Sbjct 2236511 TTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTAGA 2236452 Query 76023 TTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTA 76082 | ||||||||||||| ||||||| | | || || || |||||| || | | | Sbjct 2236451 TAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGG-ATTCTC 2236393 Query 76083 AAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 76141 || || || ||||| |||| || ||||| |||| | |||| ||||||| | | | Sbjct 2236392 AACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATG 2236333 Query 76142 TTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201 ||||| | ||| ||||||| ||||| || || | || |||||| | || | || Sbjct 2236332 TTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTA 2236273 Query 76202 CTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CAA-ATT---TTCCA 76252 | || || || | ||| | || || ||| | ||| | | | || Sbjct 2236272 CGAGTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTATCA 2236213 Query 76253 TC--TATCA-CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTA 76309 || | ||| |||| |||||| ||||| || | ||||| || || || | Sbjct 2236212 TCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCT 2236153 Query 76310 GCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGAT-AGTTCCAAGATT 76368 | | ||| | | ||||| || || ||| | || || | ||||| | Sbjct 2236152 GGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTC 2236093 Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 || | ||||| | || |||||||| | |||||||| | | || ||||| || ||||| Sbjct 2236092 TTCT-GGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTC 2236034 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTAT-- 76486 |||||| |||| || | | ||| | | ||||| || | ||||| | Sbjct 2236033 TGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTC 2235978 Query 76487 --CG--CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATC 76542 || |||| || |||| ||| | || | |||||||||||| || | || || Sbjct 2235977 CACGACCTTC-CT-TTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTC 2235920 Query 76543 ATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCG 76602 | | |||||| ||| | ||| | | || | ||| || |||| | | |||| Sbjct 2235919 GGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCT 2235860 Query 76603 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662 |||||| || |||||||| ||||||||||| |||||||||| || ||| ||| || Sbjct 2235859 TTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTC 2235800 Query 76663 ATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAG 76722 ||||| ||||| || || | || | | || || | |||||||||||| | Sbjct 2235799 TTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAA 2235740 Query 76723 ATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTT 76782 || | || | |||| || || || ||||| || ||||| | ||| | || ||||| Sbjct 2235739 GTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTT 2235680 Query 76783 ATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATA 76842 || ||||||||| |||||||||||| ||||| || ||||| || || |||| ||| || Sbjct 2235679 GTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTA 2235620 Query 76843 ACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGAT 76902 ||| |||||||||||| ||| | || ||||| || || |||| || || Sbjct 2235619 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAAT 2235560 Query 76903 TAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 76962 || |||||| ||||| || ||||| || || || || |||||| |||| || Sbjct 2235559 TAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAAC 2235500 Query 76963 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGC 77022 | ||||| |||||||| | ||| || || || ||||||| |||||||| || Sbjct 2235499 TAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 2235440 Query 77023 ATGAGTGAACCATTTTT----CAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT 77078 |||||||| | || | || ||||| |||| ||||||||||| | | || | Sbjct 2235439 GTGAGTGAAATACTTCTGACTCATAAAGT----TGTAGGTTTCAATAACCCTTGCAATGT 2235384 Query 77079 CCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCT 77138 | |||||| || | |||||||||||| | | || ||||| |||||| || | Sbjct 2235383 CATCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACAT 2235324 Query 77139 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 77197 | ||| ||| ||| | ||| ||| ||||||| || || || ||||| || || || | Sbjct 2235323 TGCCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACT 2235264 Query 77198 GAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 ||||| ||||| ||||| | |||| | || || || Sbjct 2235263 GAAAA-TCTCTATCGTAGACAATAGCAGAGTTCAG 2235230 >seq2 Length=2687137 Score = 237 bits (262), Expect = 2e-57 Identities = 573/861 (67%), Gaps = 10/861 (1%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| ||| || | || ||||| || || || || || |||| || || || Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| |||||||| ||||| || || || || | |||||| || | || | Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 |||||||| |||||||| || | |||| ||||| || |||||||| | | Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895 Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 || || ||||| || || ||| | || || |||||| |||||| || | || || Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTT-TTCAATCTCGACAGCCTCTGTAATAAT 442954 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | | || |||||||||| | | | |||| || || | || || ||||| Sbjct 442955 CTTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAA 443014 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 || || | ||||||||||| | ||| | || || || || || | || ||||| Sbjct 443015 GTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 443074 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 || || | |||||| | ||| || |||| |||||||| || |||||||| || ||||| Sbjct 443075 AAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTC 443134 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCT 46814 ||||| ||||| || || | | || || | ||||| | || |||||| || Sbjct 443135 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCT 443194 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| |||||||||| || | ||| || || || || || ||||| || | || Sbjct 443195 CATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAA 443254 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 | ||| | |||||| | || ||||| || || | || |||| || || Sbjct 443255 TTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTG 443314 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 ||||| || || || ||||| |||||||||||| ||||||| | || || ||||| Sbjct 443315 GATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTC 443374 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 | | || ||| |||||| ||||| || || |||||| ||||||||||| | Sbjct 443375 AGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAA-GG 443433 Query 47055 CAATACATGTTTA-ATAAAATATTTTTCA---TCGGTAGTCAGTTTATTCCAGTCATTGA 47110 ||| | | | | |||||||| || ||| ||| | | | ||||||||||||| | Sbjct 443434 CAAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCATGCA 443493 Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACA 47170 ||| ||| | |||| ||| || || ||||| || || || || || | ||| |||| Sbjct 443494 AATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACA 443553 Query 47171 TATTCCATATATCACGATATT 47191 | | ||| || || |||||| Sbjct 443554 TTTGCCAGATGTCGTGATATT 443574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934301971520