Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq2 172 6e-38
>seq2
Length=2687137
Score = 172 bits (190), Expect = 6e-38
Identities = 544/838 (65%), Gaps = 5/838 (1%)
Strand=Plus/Plus
Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299
||||||| || || |||||||| | || || || || ||||| |||||||||||||| |
Sbjct 442738 TTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTCTCCATGAAATCAAATGGATTGG 442797
Query 23300 AAGTATTATATACAGCTTTACATGATAATTCCTTTAAA-AGCCTATCTGCTACAAATTCA 23358
|| || || ||| || | || | || ||||| || || || |||
Sbjct 442798 TGACGTTGTACACTTTTTTGT-TGCCCAGAGCTACCAGTAGTCTATCAGCAACGAACTCA 442856
Query 23359 ATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATAT 23418
| ||| || |||||||| |||| || || | | || |||| |||||
Sbjct 442857 ACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAGGAAACAGGAAGAGCATCTGTG 442916
Query 23419 AAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCACTA 23478
||| || ||||||||| ||||| ||| |||| || | ||| | ||| |||||
Sbjct 442917 AAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATCTTTTCAACGATTTCCTCACTG 442976
Query 23479 GGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCC 23538
| | | || || | || | || || ||||| || |||| ||||||||
Sbjct 442977 GCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAGTCGGTGTGTAATCCTTCATCT 443036
Query 23539 CTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAA 23598
|| | ||| | ||||| || || || || |||||||| | |||| ||||| | |||
Sbjct 443037 CTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATAAGACCTCTCTTTTTCAACCAG 443096
Query 23599 AATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGA 23658
|| || | ||| || || || |||||||| ||||| |||||||| || ||||| || | |
Sbjct 443097 AAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCAACAGCAGCGAAGGCAACCAAA 443156
Query 23659 CGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAAT 23718
||| | | || |||| | ||| | ||||||| | | | ||| | |||||| |
Sbjct 443157 CGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTCATGGCCCAGTCAGCCTTTTCT 443216
Query 23719 TTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTT 23778
|| | ||| ||| || || || || || || | || ||||| |||| |
Sbjct 443217 TTGATACATGGAATGGTCTCGATGGCATTGAACAAGAATTCGGATTCTTTTGGATCTTTG 443276
Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838
|| || |||||||| | || || |||| || || || || || || || |||
Sbjct 443277 ATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTGGATGTTCTCCATCATGATTTGA 443336
Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898
|| || ||||||||| | ||||| | | |||||| ||| || ||| | |||
Sbjct 443337 AAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTCAGCGCTGAAGTTTTCCACCAAA 443396
Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958
||||| || |||||||||||| |||||||| || |||||||| |||||||
Sbjct 443397 TTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGCAAGAACTCTAGAGATAAAATAC 443456
Query 23959 CTTTCAT--CAGTTGATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCA 24015
| |||| ||| ||| || ||||| |||| | ||| ||| || || | |||
Sbjct 443457 TTCTCATTGTCGTTCATACGATTATTCCAGTCATGCAAATCCTTTCCCAAGTCTATTTCC 443516
Query 24016 TCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTT 24073
|| | |||||||| || ||| | || |||||| |||| || || | || ||
Sbjct 443517 TCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACATTTGCCAGATGTCGTGATATT 443574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487928295400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |