Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2 172 6e-38 >seq2 Length=2687137 Score = 172 bits (190), Expect = 6e-38 Identities = 544/838 (65%), Gaps = 5/838 (1%) Strand=Plus/Plus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 ||||||| || || |||||||| | || || || || ||||| |||||||||||||| | Sbjct 442738 TTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTCTCCATGAAATCAAATGGATTGG 442797 Query 23300 AAGTATTATATACAGCTTTACATGATAATTCCTTTAAA-AGCCTATCTGCTACAAATTCA 23358 || || || ||| || | || | || ||||| || || || ||| Sbjct 442798 TGACGTTGTACACTTTTTTGT-TGCCCAGAGCTACCAGTAGTCTATCAGCAACGAACTCA 442856 Query 23359 ATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATAT 23418 | ||| || |||||||| |||| || || | | || |||| ||||| Sbjct 442857 ACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAGGAAACAGGAAGAGCATCTGTG 442916 Query 23419 AAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCACTA 23478 ||| || ||||||||| ||||| ||| |||| || | ||| | ||| ||||| Sbjct 442917 AAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATCTTTTCAACGATTTCCTCACTG 442976 Query 23479 GGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCC 23538 | | | || || | || | || || ||||| || |||| |||||||| Sbjct 442977 GCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAGTCGGTGTGTAATCCTTCATCT 443036 Query 23539 CTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAA 23598 || | ||| | ||||| || || || || |||||||| | |||| ||||| | ||| Sbjct 443037 CTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATAAGACCTCTCTTTTTCAACCAG 443096 Query 23599 AATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGA 23658 || || | ||| || || || |||||||| ||||| |||||||| || ||||| || | | Sbjct 443097 AAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCAACAGCAGCGAAGGCAACCAAA 443156 Query 23659 CGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAAT 23718 ||| | | || |||| | ||| | ||||||| | | | ||| | |||||| | Sbjct 443157 CGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTCATGGCCCAGTCAGCCTTTTCT 443216 Query 23719 TTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTT 23778 || | ||| ||| || || || || || || | || ||||| |||| | Sbjct 443217 TTGATACATGGAATGGTCTCGATGGCATTGAACAAGAATTCGGATTCTTTTGGATCTTTG 443276 Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || || |||||||| | || || |||| || || || || || || || ||| Sbjct 443277 ATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTGGATGTTCTCCATCATGATTTGA 443336 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898 || || ||||||||| | ||||| | | |||||| ||| || ||| | ||| Sbjct 443337 AAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTCAGCGCTGAAGTTTTCCACCAAA 443396 Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958 ||||| || |||||||||||| |||||||| || |||||||| ||||||| Sbjct 443397 TTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGCAAGAACTCTAGAGATAAAATAC 443456 Query 23959 CTTTCAT--CAGTTGATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCA 24015 | |||| ||| ||| || ||||| |||| | ||| ||| || || | ||| Sbjct 443457 TTCTCATTGTCGTTCATACGATTATTCCAGTCATGCAAATCCTTTCCCAAGTCTATTTCC 443516 Query 24016 TCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTT 24073 || | |||||||| || ||| | || |||||| |||| || || | || || Sbjct 443517 TCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACATTTGCCAGATGTCGTGATATT 443574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487928295400