Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq3 102 1e-16 seq4 86.0 8e-12 >seq3 Length=1828518 Score = 102 bits (112), Expect = 1e-16 Identities = 285/432 (66%), Gaps = 23/432 (5%) Strand=Plus/Plus Query 50475 GGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAAT 50534 || ||||| || || || ||||| ||||||||| | ||||||||||| | || | | | Sbjct 322390 GGCGATTTGGGGCCAGTGTACGGATTTCAATGGCGCCATTTTGGAGCTCAGTATAAAGAC 322449 Query 50535 TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACT-GCAAAA--AATTATAACGACG 50591 || | | | ||| || ||||| | || ||||| || | |||| ||| || Sbjct 322450 TGTAAGACAGACTACACTGGCCAAGGGTTTGACCAACTTGCTAGGGTAATTGAAAC-ACT 322508 Query 50592 TTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATA 50651 | | | | || || | || | | || | |||| || ||||| || | ||| | Sbjct 322509 TCGTA--CCAATCCATATGACAGAAGAATAATTATGAGTGCATGGAACCCGCCTGATTTT 322566 Query 50652 GATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG---------CCACA 50702 || ||| | | | || || |||||||| || ||||| ||||| | | | | Sbjct 322567 GAGAAAATGGCTCTCCCACCCTGTCATGTATTTTGTCACTTTTACGTTTCTTTCCCGAAA 322626 Query 50703 GACAA------TGTTTTATCCTGTC-AATGTTATCAAAGATCAGCTGATATGGGTTTAGG 50755 || || || |||| ||| ||||| |||| | || ||||||||| ||||| Sbjct 322627 GATAAAAAACCTGAACTATCTTGTTTAATGT-ATCAGCGCTCCTGTGATATGGGATTAGG 322685 Query 50756 CGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGA 50815 |||||||||||||| ||| ||| |||||| | || | |||| ||||| | || || Sbjct 322686 TGTTCCTTTCAACGTCGCTAGTTATGCTTTACTGACTAAAATGATAGCTCACGTAGTTGA 322745 Query 50816 TATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGT 50875 |||| | || || ||||| ||||| | || || || ||| | ||||| || ||||| Sbjct 322746 TATGGATTGTGGGGACTTTATACATACCATGGGTGATGCACATGTGTACCTGGACCACGT 322805 Query 50876 CGATGCTTTAAA 50887 ||||| ||||| Sbjct 322806 AGATGCCTTAAA 322817 >seq4 Length=1577441 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 63748 CCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTATGATT 63807 ||| |||| |||||||| |||||||| | | |||||||||||| |||| | | Sbjct 251676 CCACAAATTGGTGATAAGTTTGCTTCCCGTCACGGTCAAAAAGGTACCATTGGTGTTACC 251617 Query 63808 TATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCAAT 63867 ||| |||| ||||||||||| || | || |||||||| || ||| | | ||||| Sbjct 251616 TATAGACACGAAGATATGCCATTCAGTGCGGAGGGTATCGTTCCAGATTTGATTATCAAC 251557 Query 63868 CCACACGCTTTTCCCAGTCGTATGACCGTT 63897 ||||| || |||| ||||||||| ||| Sbjct 251556 CCACATGCCATTCCTTCTCGTATGACGGTT 251527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667075108277160