Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 1e-16
seq4 86.0 8e-12
>seq3
Length=1828518
Score = 102 bits (112), Expect = 1e-16
Identities = 285/432 (66%), Gaps = 23/432 (5%)
Strand=Plus/Plus
Query 50475 GGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAAT 50534
|| ||||| || || || ||||| ||||||||| | ||||||||||| | || | | |
Sbjct 322390 GGCGATTTGGGGCCAGTGTACGGATTTCAATGGCGCCATTTTGGAGCTCAGTATAAAGAC 322449
Query 50535 TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACT-GCAAAA--AATTATAACGACG 50591
|| | | | ||| || ||||| | || ||||| || | |||| ||| ||
Sbjct 322450 TGTAAGACAGACTACACTGGCCAAGGGTTTGACCAACTTGCTAGGGTAATTGAAAC-ACT 322508
Query 50592 TTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATA 50651
| | | | || || | || | | || | |||| || ||||| || | ||| |
Sbjct 322509 TCGTA--CCAATCCATATGACAGAAGAATAATTATGAGTGCATGGAACCCGCCTGATTTT 322566
Query 50652 GATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG---------CCACA 50702
|| ||| | | | || || |||||||| || ||||| ||||| | | | |
Sbjct 322567 GAGAAAATGGCTCTCCCACCCTGTCATGTATTTTGTCACTTTTACGTTTCTTTCCCGAAA 322626
Query 50703 GACAA------TGTTTTATCCTGTC-AATGTTATCAAAGATCAGCTGATATGGGTTTAGG 50755
|| || || |||| ||| ||||| |||| | || ||||||||| |||||
Sbjct 322627 GATAAAAAACCTGAACTATCTTGTTTAATGT-ATCAGCGCTCCTGTGATATGGGATTAGG 322685
Query 50756 CGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGA 50815
|||||||||||||| ||| ||| |||||| | || | |||| ||||| | || ||
Sbjct 322686 TGTTCCTTTCAACGTCGCTAGTTATGCTTTACTGACTAAAATGATAGCTCACGTAGTTGA 322745
Query 50816 TATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGT 50875
|||| | || || ||||| ||||| | || || || ||| | ||||| || |||||
Sbjct 322746 TATGGATTGTGGGGACTTTATACATACCATGGGTGATGCACATGTGTACCTGGACCACGT 322805
Query 50876 CGATGCTTTAAA 50887
||||| |||||
Sbjct 322806 AGATGCCTTAAA 322817
>seq4
Length=1577441
Score = 86.0 bits (94), Expect = 8e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 63748 CCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTATGATT 63807
||| |||| |||||||| |||||||| | | |||||||||||| |||| | |
Sbjct 251676 CCACAAATTGGTGATAAGTTTGCTTCCCGTCACGGTCAAAAAGGTACCATTGGTGTTACC 251617
Query 63808 TATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCAAT 63867
||| |||| ||||||||||| || | || |||||||| || ||| | | |||||
Sbjct 251616 TATAGACACGAAGATATGCCATTCAGTGCGGAGGGTATCGTTCCAGATTTGATTATCAAC 251557
Query 63868 CCACACGCTTTTCCCAGTCGTATGACCGTT 63897
||||| || |||| ||||||||| |||
Sbjct 251556 CCACATGCCATTCCTTCTCGTATGACGGTT 251527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667075108277160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |