Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08] 177 sequences; 9,361,826 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq24 242 4e-59 >seq24 Length=433630 Score = 242 bits (268), Expect = 4e-59 Identities = 569/853 (67%), Gaps = 7/853 (1%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||| |||||| ||||| |||||||| |||||||| ||| || || || Sbjct 106008 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 106067 Query 13973 TCCATAAAATCAAATGGATTTGTTGAC-ATAAACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| || ||||||||| |||||||| | |||| || | || || ||| || Sbjct 106068 TCCATGAAGTCAAATGGA-TTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAG 106126 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 || ||| || |||| |||||||| ||| || |||| || || ||||| || | || Sbjct 106127 TAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAA 106186 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 ||||||| | || || | |||||| || |||||||| | ||||| Sbjct 106187 GGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAAT 106246 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 14211 | || ||||| | | | || |||| ||| ||| | || || ||||| Sbjct 106247 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 106306 Query 14212 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 14271 ||| || | ||||| ||||| | |||||| || || || || || || |||||||| Sbjct 106307 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 106366 Query 14272 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 14331 | |||| || || ||||| || || | ||| || ||||| |||||||| || ||||| Sbjct 106367 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 106426 Query 14332 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14391 ||| ||||| || || | || ||||| | ||| |||| | | | || |||||| | Sbjct 106427 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 106486 Query 14392 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATG 14451 | ||||| |||| |||| ||| ||| | || || || || ||||| || | Sbjct 106487 CATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAA 106546 Query 14452 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 14511 ||| |||||| | | | ||||| |||||||| || ||| || | || ||||| Sbjct 106547 TTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGTG 106606 Query 14512 TATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14571 ||||| ||||| ||||| ||||| ||||| ||| | ||||| | ||| ||||| Sbjct 106607 AATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCTC 106666 Query 14572 TG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATG 14630 | | | |||| |||| |||| |||||||| || ||||| ||| || ||||| || | Sbjct 106667 AGCACTGAAAT-TTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGG 106725 Query 14631 CCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGA---GTTTTTTCCAATCGGCTA 14687 | | | | || ||| ||| || | || | | | | || ||||| || | Sbjct 106726 CAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATGCA 106785 Query 14688 AATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACA 14747 |||||||| || |||| ||| ||| | |||||||| ||| | || | || |||| Sbjct 106786 AATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTACA 106845 Query 14748 TTACCCATATTTC 14760 || ||| || || Sbjct 106846 TTTGCCAGATATC 106858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344532810360