Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08] 177 sequences; 9,361,826 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq28 224 9e-54 >seq28 Length=271156 Score = 224 bits (248), Expect = 9e-54 Identities = 1166/1833 (64%), Gaps = 53/1833 (3%) Strand=Plus/Minus Query 36835 TAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTT 36894 || ||||| ||||| |||| || |||| || ||||| ||||||||||||| ||| Sbjct 183273 TAGTACATACCAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTA 183214 Query 36895 GCGTATGTAGGATT-ATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACC 36953 | || ||| ||| | | || ||| || ||| |||||| ||| | || Sbjct 183213 CCCATAGTTGGAGCCATC-AGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGA 183155 Query 36954 TCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATAT 37013 ||| ||||| ||||| || | |||| |||||||| ||||||||||| || || || | Sbjct 183154 TCTATCGGCAGCCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAG 183095 Query 37014 TTGTTTTATATTATCTGGTAAAT---CTAAATGTTGAATAGAACCATTATGTAACACAAT 37070 ||| | | || |||| | |||| ||||||||| || || | | | | || Sbjct 183094 GCCTTTAAGTTGCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGAT 183035 Query 37071 TGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGG 37130 ||| || |||| || | ||| | | | | ||| || | ||||| || || Sbjct 183034 ATGATTTTTCATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGG 182975 Query 37131 ATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGG 37190 ||| |||| ||||| ||||||| |||||| | | || || || ||| ||| || || Sbjct 182974 ATTAACAATTTGAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGG 182915 Query 37191 TTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT 37250 ||| | |||| || | || | ||||| || || || ||||| ||||| ||||| | Sbjct 182914 TTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAAC 182855 Query 37251 TAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTT---TTTTAGTTCATTCCAATC 37307 ||| | ||||| || || |||| | || |||| ||| ||| | ||| || Sbjct 182854 TAGCAACGAGTTTCTTAAACC-TGTGGA--AACAATCTTGGCTTTGAGTGATTCCCATTC 182798 Query 37308 CCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGG 37367 ||| | || | || ||||| ||||| |||||||| | ||| || | | ||||| Sbjct 182797 CCACAGCTCAGAGGGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGG 182738 Query 37368 AGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA--GCTAGTTCGCAACTAGATTCT 37425 |||| | | | || || || | ||| | || | |||| |||| | ||| Sbjct 182737 AGAACCTTGGAAGGTTTCGTAGGCTCCTT--CTTCGACGGCTAATTCGTTGGAGGCTTCC 182680 Query 37426 AGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTA 37485 | || |||| || || ||||| ||||| || ||||| | ||| |||||| | Sbjct 182679 AAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAA 182620 Query 37486 TCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATG 37545 || || | | | ||| ||||| ||||||| ||||| |||||||| | | |||| Sbjct 182619 TCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATA 182560 Query 37546 GGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATT 37605 ||||||| | |||| ||||| | |||| || || ||| |||| | || || Sbjct 182559 GGTCTATTACGCATATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATA 182500 Query 37606 ATTTTATTTAGATTTTTAACTAGT----ATTTTCGTAATT--------ATTCTC-AACTT 37652 ||| | || | || || ||| | ||| || ||| || || || || Sbjct 182499 ATTCTGTTCAAGTT----ACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTT 182444 Query 37653 GT-CGAACA-TAAATA-CGTTATTATTAACAAATTTACTCAACGA--AATAGATCCTAGA 37707 || | | || | | || | | | | |||||| || | || |||||| | | Sbjct 182443 GTACCAGCAGTGAGTATCATCGGTTTCAACAAA--GGCTGGAAGAGCAATAGAAGCCAAG 182386 Query 37708 TTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTC 37767 ||||| |||||| || || | | ||| | ||| || || || ||| Sbjct 182385 TTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAG 182326 Query 37768 GATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGT 37827 ||| |||| ||||| || | || || | |||||| ||||||| ||| ||||| || Sbjct 182325 GATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGC 182266 Query 37828 ATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCT-TGC 37886 || | || || || |||| |||| ||||| | || | | ||| || ||| | || Sbjct 182265 ATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCA-AAGCTTTTGGGC 182207 Query 37887 TTTAACG--ATCGCTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAA 37944 ||| | | | ||| | ||| | |||||||| | || |||| | ||| Sbjct 182206 TTTGATGGTTTGTCTTCCACGACCTTCCT--TTTCGTATCTTTCGTACAATTCCTCAAAT 182149 Query 37945 TCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCT 38004 |||| || | || ||| | || ||| ||| | |||| | | || | ||| || Sbjct 182148 TCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCG 182089 Query 38005 TCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCT 38064 ||| | |||||| | || ||| || | |||||| | ||| || || | ||||| ||| Sbjct 182088 CCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCT 182029 Query 38065 TTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCA 38124 | | ||| || || || || ||||| | | | || | || || || Sbjct 182028 CTAGCTCTGATCTCCTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCG 181969 Query 38125 GCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTA 38184 || |||||||| || | || | | | ||| || || | ||| | ||| || || | | Sbjct 181968 GCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCA 181909 Query 38185 ATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCG 38244 | ||| | | | ||||| || | | || | ||| || | |||||||| || | ||| Sbjct 181908 ACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCG 181849 Query 38245 TTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCA 38304 || |||| | || || | || | || || |||||| || ||| || |||||| Sbjct 181848 TTAGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCA 181789 Query 38305 CCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTG 38364 || ||| ||| || |||||||| |||| || || ||||| | || ||||| || | Sbjct 181788 CCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAG 181729 Query 38365 TCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTA 38424 |||||| || | | || ||||| |||||||| || || || || |||||| Sbjct 181728 TCATCCCGCATGGCAACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTA 181669 Query 38425 AATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA--TTATATGTTTCTA 38482 || | |||||||| ||||| |||| || ||| ||| |||| ||||| ||||| | Sbjct 181668 AACAGAGTAGGAGAGGCATGAGTGAA--ATACTTCTGACTCATAAAGTTATAAGTTTCAA 181611 Query 38483 TTACATCAT-CTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGT 38541 | || || | | || ||| | || ||||| || | || || | ||| | || ||||| Sbjct 181610 TAAC-TCTTGCAATGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGA 181552 Query 38542 GGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATT 38601 || | |||| | ||| ||| | | || || || ||| |||| || || || | | Sbjct 181551 GGACGTTCTGCAACATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAAT 181492 Query 38602 CCAAAATAACTATA-TGAATAATCTCTATCGTA 38633 ||||| || |||| |||| | ||||||||||| Sbjct 181491 CCAAAGTAGTTATACTGAA-AGTCTCTATCGTA 181460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468523763388880