Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08] 177 sequences; 9,361,826 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq28 390 2e-103 seq24 174 2e-38 >seq28 Length=271156 Score = 390 bits (432), Expect = 2e-103 Identities = 1375/2138 (64%), Gaps = 29/2138 (1%) Strand=Plus/Minus Query 70790 CCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849 ||||||| | |||||||||||||| || | || |||| ||||| || |||||||| | Sbjct 183323 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 183264 Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTA 70908 | || |||| || |||| || ||||| |||||||| || | ||| |||| | Sbjct 183263 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTT- 183205 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 ||| | | |||||| |||| ||||||| ||||||||| ||||| || || ||| Sbjct 183204 GGAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCA 183145 Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028 ||||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| Sbjct 183144 GCCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGT 183085 Query 71029 TCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 | || || | ||| | ||| ||||| || || |||| ||| || |||||| Sbjct 183084 TGCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTC 183025 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || | || | ||| | || || | | | | | | ||||||||| | | Sbjct 183024 ATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATT 182965 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 ||||||||||||| ||||| | || | ||| || || || || ||||| | || Sbjct 182964 TGAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACAC 182905 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 || || | |||| |||||| | |||||| ||||| ||||||||||| || | | || | Sbjct 182904 TCGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCA-ACGA 182846 Query 71266 -TTTCTAAGACCATGTG-ATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 ||||| | ||| |||| | || || |||| || |||||||| | ||| || || | Sbjct 182845 GTTTCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAG 182787 Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383 | || ||||| | | || || ||| Sbjct 182786 AGGGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGA 182727 Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAAT 71443 | || ||||| | |||||||| |||||| ||| || || || ||| ||| | Sbjct 182726 AGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGT 182667 Query 71444 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT 71503 | || ||||| ||||||| |||| || | || ||||| || |||||| ||| Sbjct 182666 AGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTC 182607 Query 71504 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563 | || ||||| || || ||||| |||||||| || | | | |||||||| | | | Sbjct 182606 TCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCA 182547 Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623 |||| || | ||||||||||| || ||| |||| | || |||||| | || | | Sbjct 182546 TATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGT 182487 Query 71624 TTCTGACTATT-ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC-------- 71674 | | || || |||||| | || | || || ||| | | | | Sbjct 182486 TAC-GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTA 182428 Query 71675 -CATCTATTACAAACACG--TTCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCA 71730 |||| || ||| | | | ||| |||| ||| |||| ||||| || || ||| Sbjct 182427 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCT 182368 Query 71731 TTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790 | | | |||| | ||||||| |||||| ||| | || ||| || || Sbjct 182367 TCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAG 182308 Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850 || | || ||| | ||||||||||| ||||||||||| || || || |||||||||||| Sbjct 182307 TTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTT 182248 Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTA 71909 || | || | || | || || | ||| | | | || || || | | |||| | Sbjct 182247 TCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCA 182188 Query 71910 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTC 71969 | || || |||||||| | || ||| || || || ||||| | | | | | Sbjct 182187 CGACCTTCCT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGC 182129 Query 71970 TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTT 72029 | |||||| |||| | ||| | | || | ||| || |||| | | ||||| ||| Sbjct 182128 AAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTT 182069 Query 72030 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089 ||| || |||||||| ||||| | ||| |||| ||||| | ||| |||||| || Sbjct 182068 CATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTT 182009 Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149 || ||||| || ||| | ||| || | || || | |||||| || |||||||| Sbjct 182008 ACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTA 181949 Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209 | || | | || || |||||||| || || || || | || | ||| ||||| || Sbjct 181948 CAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTT 181889 Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269 | || |||| |||||||||||||||||| || | ||| || || || | || ||| Sbjct 181888 GAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGA 181829 Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 ||| ||||||||||||| ||| | ||| ||||| || || |||| |||||||| Sbjct 181828 TCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAA 181769 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389 || ||| || || ||||| || ||||| || || |||||| |||| || || Sbjct 181768 AGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAA 181709 Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449 ||||| |||||||| | || || || || ||||| | |||||||| || || Sbjct 181708 GAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATG 181649 Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509 || || | || | | || | || || || |||||| || | | || || Sbjct 181648 AGTGAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACC 181589 Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569 ||| || || | || |||||||| | || || ||||| | ||| | | || ||| Sbjct 181588 ATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATT 181529 Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629 ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || |||||| Sbjct 181528 AATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTC 181469 Query 72630 TCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 72689 || ||||| | |||| | || || || | ||| | ||| | || || | || Sbjct 181468 TCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTAAGT 181409 Query 72690 GATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAA 72747 | ||| |||| | ||||| ||||| || || || || || | || | | || Sbjct 181408 G--TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATACAAC 181351 Query 72748 TCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATT 72807 || | | || | | || | || | || | ||||||| ||| || || || ||| Sbjct 181350 TCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCAATT 181291 Query 72808 CTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCT 72867 || || || | |||||||||||| || || || || | ||| || | || || Sbjct 181290 CTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCAGCA 181231 Query 72868 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905 || || |||||| || || || ||||| || | ||| Sbjct 181230 GCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 181193 >seq24 Length=433630 Score = 174 bits (192), Expect = 2e-38 Identities = 576/883 (65%), Gaps = 16/883 (2%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| ||| || | |||||||| || || || || || |||| || || || Sbjct 106008 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 106067 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||| ||||| |||||| | || || || | ||||| |||| | | Sbjct 106068 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 106127 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 41952 | ||| || || | ||| || | ||| ||||| || ||||| || | |||| Sbjct 106128 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 106187 Query 41953 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 42011 | | |||||||| | || ||| | | || ||| || ||| || ||||| |||| Sbjct 106188 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 106245 Query 42012 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 42071 | | || |||| ||||| | | || |||||| ||| | ||| || || | Sbjct 106246 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 106305 Query 42072 AATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 42131 | || ||| | ||||| ||||| | ||| | || ||||| || || | || |||| Sbjct 106306 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 106365 Query 42132 TTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTT 42191 | || || | ||| || | ||| || ||||| ||||| ||||| ||||||||||| || | Sbjct 106366 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 106425 Query 42192 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-C 42247 | || || || ||||||| | | || | | ||| ||||| ||||| | Sbjct 106426 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 106485 Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 | || ||||| || ||||| | ||| | ||| || || || || |||||||| || || Sbjct 106486 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 106544 Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTATACATTTCTG 42365 | | || || |||||| | || ||||| |||| || || || | || | Sbjct 106545 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 106602 Query 42366 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTA 42425 | |||||||| || || ||||| || ||||| || ||| | || |||| || || | Sbjct 106603 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 106662 Query 42426 CTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAA 42485 | || | || || ||| | || ||||| || || || |||||| ||| ||||| | Sbjct 106663 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 106722 Query 42486 ACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTA-ATTTATTCCAATCAT 42542 | || | || || || ||||||| | || | || |||||||| |||| Sbjct 106723 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 106782 Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602 | ||| ||| | |||| ||| || | |||||||| || ||||| |||| || | Sbjct 106783 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 106842 Query 42603 ACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 |||| | ||||||||| || || | | ||||| | ||||| Sbjct 106843 ACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 106885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137715104520