Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08]
177 sequences; 9,361,826 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq49 141 1e-29
seq42 132 8e-27
>seq49
Length=37703
Score = 141 bits (156), Expect = 1e-29
Identities = 196/269 (73%), Gaps = 4/269 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| | |||| |||| |||| ||||| ||||| ||||| ||||||||||
Sbjct 8595 CGCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATTCAAGGTATCACAAAGCCAGCTA 8653
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|| | | |||| | | ||||| || || ||| | |||| || | ||||| |||
Sbjct 8654 TCAGAAGATTGGCCAGAAGAGGTGGTGTTAAACGTATTTCTGCTTTAATTTATGAGGAGG 8713
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACC 16609
|||| | ||||||||||| ||| | | | ||| ||| |||||| || || || ||
Sbjct 8714 TTCGAGCTGTTTTGAAGACTTTCTTGGAAAACGTGATCAGAGATGCTGTTACA-TACACT 8772
Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669
|||||||| || | ||||| || || || ||||| | |||||||| |||| | |||
Sbjct 8773 GAGCACGCCAAGAGGAAGACCGTGACATCATTGGATGTTGTCTATGCCCTGAAGAGACAA 8832
Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|| |||| | |||||||| ||| ||||
Sbjct 8833 GGACGTACTTTGTATGGTTTCGGAGGTTA 8861
>seq42
Length=295284
Score = 132 bits (146), Expect = 8e-27
Identities = 191/267 (72%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | |||| |||| |||| ||||| ||||| ||||| |||||||||||
Sbjct 200275 GCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATTCAAGGTATCACAAAGCCAGCTAT 200333
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | |||| | | ||||| || |||||| | || | ||| |||| ||||| |
Sbjct 200334 CAGAAGATTGGCCAGAAGAGGTGGTGTTAAGCGTATTTCCGCTTTGATCTACGAAGAAGT 200393
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| ||| | ||| ||| || |||||| | || || ||
Sbjct 200394 CAGAGCTGTGCTGAAGACTTTCTTAGAGAACGTCATTAGAGATGCTGTTACTTACACTGA 200453
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||| || || | |||||||| || || ||||| ||||||| || |||||| | |||||
Sbjct 200454 GCATGCCAAGAGAAAGACTGTTACTTCTCTGGATGTCGTCTACGCTTTGAAAAGACAAGG 200513
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||| | |||||||| ||| ||||
Sbjct 200514 ACGTACCTTGTATGGTTTCGGAGGTTA 200540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075038167661
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |