Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08]
177 sequences; 9,361,826 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq15 190 4e-43
seq21 161 2e-34
seq3 147 4e-30
seq132 89.7 1e-12
>seq15
Length=629035
Score = 190 bits (210), Expect = 4e-43
Identities = 186/240 (78%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | |||||| | ||||| |||||| || ||||| || || || ||||
Sbjct 86125 TACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAG 86066
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| ||||||||||||| ||||| || |||||||| || | | |||||| || ||||
Sbjct 86065 ACAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAG 86006
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| ||||||||||| ||||||||||| | || ||||| || || || || | || |
Sbjct 86005 GAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGA 85946
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTTT 82821
||||||| || || ||||| || || || ||||| || || ||||||||| || | ||||
Sbjct 85945 CTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTTTGTCTTTT 85886
>seq21
Length=136665
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661
|| ||||| ||||| ||||| || || ||||| |||||||| ||| |||||||||||||
Sbjct 136345 ACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCGTCTTCC 136404
Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721
||||| || ||||| ||||| | | ||| || || ||||| || |||||||| ||||||
Sbjct 136405 AGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGA 136464
Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781
||||| | ||| || || ||||| ||||| | ||||| || | ||| || |||||
Sbjct 136465 ATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGTGATAGTCTTA 136524
Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | ||||| || || ||||||||
Sbjct 136525 CCAGTTAGAGTCTTGACGAAAATCTGCAT 136553
Score = 96.9 bits (106), Expect = 7e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| || | ||||| ||||| || || ||||| ||||| || || || ||||
Sbjct 136553 TACCACCTCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAG 136612
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGA 82694
| ||| ||||||| ||||| ||||| || ||||||||||| || | ||| |||
Sbjct 136613 AAAGAGTTCTACCATCTTCCAGTTGCTTACCAGCAAAGATCAGACGTTGCTGA 136665
>seq3
Length=641798
Score = 147 bits (162), Expect = 4e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||||| |||||| || || || || || || |||||
Sbjct 231944 ACCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGA 231885
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | ||||||| || || | ||| || ||||||||||| || | ||||| || |||||
Sbjct 231884 CAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGG 231825
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
||||| ||||| || |||||||| | || || || ||||| || || || || ||
Sbjct 231824 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCAC 231765
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| || || ||||| || || | |||||||| || || ||||||
Sbjct 231764 CTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATT 231716
>seq132
Length=178
Score = 89.7 bits (98), Expect = 1e-12
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || || || | ||||| ||||| || || ||||| || || || || |||||||
Sbjct 66 TACCACCCCTTAATCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAG 125
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTA 82683
| ||| ||||||||||||| ||||| || |||||||| ||||
Sbjct 126 AAAGAGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATTA 167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981824973400003
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |