Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08] 177 sequences; 9,361,826 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq24 149 5e-31 >seq24 Length=433630 Score = 149 bits (164), Expect = 5e-31 Identities = 391/585 (67%), Gaps = 24/585 (4%) Strand=Plus/Minus Query 43721 TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAA 43780 || || || || |||||||||||||| | || | || || |||||||| || || ||| Sbjct 106864 TACCACGATATCTGGCAAATGTACAAGCAGGCCGAAGCTTCCTTTTGGACTGCTGAGGAA 106805 Query 43781 GTTGATTTGACTAAAGACTTAGCAC-ATTGGATTG--CATTAAAACCACAA-GAAAAACA 43836 | || || ||| || || ||| | |||| | | | ||| | || |||||| Sbjct 106804 ATAGACCTGGGTAAGGATTT-GCATGACTGGAATAATCGTATGAACGATAATGAAAAATT 106746 Query 43837 TTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTT 43896 || || || || | || || |||||||| ||||| || ||||||||||| || Sbjct 106745 CTTCATCTCGAGAGTCCTTGCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTT 106686 Query 43897 GGTTAGTCGGTTT--GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954 ||| | ||| | || || |||||| | || |||||| ||| ||||| || || Sbjct 106685 GGTG-GAAAATTTCAGTGCT-GAGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTC 106628 Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014 || || || || || ||||| || || | ||| | ||||| ||||| |||||| Sbjct 106627 CAGATCATGATGGAGAACATTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATC 106568 Query 44015 AAAGATGGGCACGAGAAGCATCGATT---GTTTAATGCGATAGAAACAGTACCTGCGATT 44071 |||||| || ||| | | ||| ||| ||||| || || || | || || Sbjct 106567 AAAGATC--CAAAAGAGTC-TGAATTCCTGTTCAATGCCATCGAGACCATTCCATGTATC 106511 Query 44072 AAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT------TTTGGA 44125 ||| | || || ||||||||| | | |||||| ||| |||| | || | Sbjct 106510 AAAGAAAAGGCTGACTGGGCCATGAGATGGAT---TTCTGATGACGATGCATTGTTCGCT 106454 Query 44126 GAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCC 44185 ||||| | || || || || | ||| || || || |||||||||||||| ||||| | Sbjct 106453 GAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAGGATCTTTTGCTTCT 106394 Query 44186 ATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATA 44245 || || ||||| ||||| ||||| | ||||| || ||||| || || |||||| | || Sbjct 106393 ATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATT 106334 Query 44246 AGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTT 44290 | | || || || ||||| || |||||||||||| || || Sbjct 106333 TGCAGAGACGAGGGATTACACACTGACTTTGCTTGCTTGCTATTT 106289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455142612885