Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08] 177 sequences; 9,361,826 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq15 127 1e-24 seq21 114 9e-21 seq3 114 9e-21 >seq15 Length=629035 Score = 127 bits (140), Expect = 1e-24 Identities = 171/234 (73%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| ||||| |||||||| | || |||||| ||||||||||| || Sbjct 86126 ATACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCA 86067 Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| | |||| ||||| ||||| || ||||| |||||||| || || || | Sbjct 86066 GACAGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAG 86009 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 ||| | |||||||| || ||||| ||| || ||| | |||||||||| ||| Sbjct 86008 GAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CGATGGTGTCGGAGGA 85951 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| ||||| ||||| || || | |||||| ||||| || ||||| Sbjct 85950 CTCGACTTCCAAGGTAATAGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCAT 85897 >seq21 Length=136665 Score = 114 bits (126), Expect = 9e-21 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || ||||| ||||| || |||| |||||| ||| |||||||| || |||||||| | Sbjct 136327 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAA 136386 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| | |||| ||||| ||||| || || ||||||||||| ||||| || | || Sbjct 136387 AGAGTT--CTACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 136444 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || ||||| | || | ||| | || || || | || || Sbjct 136445 GAATACCTTCCTTGTCTTGAATCTT-AGATTTGACGTTATCAATAGTATCTGATGACTCT 136503 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| || || || ||||| ||||| || ||||| Sbjct 136504 ACCTCAAGAGTGATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 136553 >seq3 Length=641798 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| ||| | |||| ||| | || |||||||||||||||||| || | Sbjct 231943 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGAC 231884 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| ||||| || |||||||||| |||||| || || | || Sbjct 231883 AAAGTT--CTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAG 231826 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | || ||||| ||| ||||| ||| | | | || ||||||| || |||| Sbjct 231825 GAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCA 231766 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || || ||||| || || |||||||| ||||| |||||||| Sbjct 231765 CCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCAT 231717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989623433209