Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007765.1_202016-02-08]
125 sequences; 9,357,276 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq23 242 4e-59
>seq23
Length=328616
Score = 242 bits (268), Expect = 4e-59
Identities = 569/853 (67%), Gaps = 7/853 (1%)
Strand=Plus/Plus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
||||| || ||| |||||| ||||| |||||||| |||||||| ||| || || ||
Sbjct 8460 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 8519
Query 13973 TCCATAAAATCAAATGGATTTGTTGAC-ATAAACACTTTATCACAACCTAGTTCTAATAG 14031
||||| || ||||||||| |||||||| | |||| || | || || ||| ||
Sbjct 8520 TCCATGAAGTCAAATGGA-TTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAG 8578
Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091
|| ||| || |||| |||||||| ||| || |||| || || ||||| || | ||
Sbjct 8579 TAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAA 8638
Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151
||||||| | || || | |||||| || |||||||| | |||||
Sbjct 8639 GGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAAT 8698
Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 14211
| || ||||| | | | || |||| ||| ||| | || || |||||
Sbjct 8699 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 8758
Query 14212 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 14271
||| || | ||||| ||||| | |||||| || || || || || || ||||||||
Sbjct 8759 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 8818
Query 14272 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 14331
| |||| || || ||||| || || | ||| || ||||| |||||||| || |||||
Sbjct 8819 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 8878
Query 14332 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14391
||| ||||| || || | || ||||| | ||| |||| | | | || |||||| |
Sbjct 8879 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 8938
Query 14392 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATG 14451
| ||||| |||| |||| ||| ||| | || || || || ||||| || |
Sbjct 8939 CATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAA 8998
Query 14452 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 14511
||| |||||| | | | ||||| |||||||| || ||| || | || |||||
Sbjct 8999 TTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGTG 9058
Query 14512 TATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14571
||||| ||||| ||||| ||||| ||||| ||| | ||||| | ||| |||||
Sbjct 9059 AATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCTC 9118
Query 14572 TG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATG 14630
| | | |||| |||| |||| |||||||| || ||||| ||| || ||||| || |
Sbjct 9119 AGCACTGAAAT-TTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGG 9177
Query 14631 CCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGA---GTTTTTTCCAATCGGCTA 14687
| | | | || ||| ||| || | || | | | | || ||||| || |
Sbjct 9178 CAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATGCA 9237
Query 14688 AATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACA 14747
|||||||| || |||| ||| ||| | |||||||| ||| | || | || ||||
Sbjct 9238 AATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTACA 9297
Query 14748 TTACCCATATTTC 14760
|| ||| || ||
Sbjct 9298 TTTGCCAGATATC 9310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482344846335000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |