Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08]
227 sequences; 9,374,785 total letters
Query= NC_000902.1
Length=60942
Score E
Sequences producing significant alignments: (Bits) Value
seq95 679 0.0
>seq95
Length=1024
Score = 679 bits (752), Expect = 0.0
Identities = 400/416 (96%), Gaps = 0/416 (0%)
Strand=Plus/Plus
Query 4827 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 4886
|||| | ||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 609 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 668
Query 4887 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 4946
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 728
Query 4947 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCACACTCACAACAATGAGTGGCAGATAT 5006
| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 729 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTGGCAGATAT 788
Query 5007 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCAATTTC 5066
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 789 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTC 848
Query 5067 TGATGCTGAATCAATGAGGTCTGCCATCTTTCATTAATCCCTGAATTGTTGGTTAATACG 5126
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 849 TGATGCTGAATCAATGATGTCTGCCATCTTTCATTAATCCCTGAACTGTTGGTTAATACG 908
Query 5127 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 5186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 968
Query 5187 CATGTTCACCGTTCCTTAAAGACGCCGTTTAACATGCCGATCGCCAGACTTAAATG 5242
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 969 CATGTTCATCGTTCCTTAAAGACGCCGTTTAACATGCCGATTGCCAGGCTTAAATG 1024
Score = 176 bits (194), Expect = 2e-39
Identities = 109/117 (93%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 4519 TGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 4578
||||| |||||||||||||||||| ||||| || || |||||||| ||||||||||||||
Sbjct 433 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 492
Query 4579 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 4635
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 493 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 549
Score = 167 bits (184), Expect = 9e-37
Identities = 107/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 58885 TGCTGCTCCCAGCTCAACTCTCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 58944
||||| | | |||||||| | ||| ||||| || || |||||||| ||||||||||||||
Sbjct 433 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 492
Query 58945 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 59001
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 493 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 549
Score = 138 bits (152), Expect = 4e-28
Identities = 175/238 (74%), Gaps = 17/238 (7%)
Strand=Plus/Plus
Query 59508 TCACTTCACACCTCTCTGTTTGTTGATAAGTTCAATATCCTGCTGGCAACTGGCGCAAGC 59567
||||||| |||||||||||| |||||||||| | ||||| ||||||||| || ||||
Sbjct 654 TCACTTCGAACCTCTCTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGT 713
Query 59568 TCTGCATCCACGAACAGCCAGGCGTCGCCGCTCATCTATCGGATCGCCACACTCGCAACA 59627
| || || |||| ||||||||| || ||||||||||||||||||||||| |||||
Sbjct 714 CCGACAACCCTGAACGACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACA 773
Query 59628 ATGAGTAGCAGATGGGGCAT-----TACTATCGG---ATTTGTATTTTTGCAGGGAGAGA 59679
|||||| |||||| || | | | ||| |||| || |||| | |
Sbjct 774 ATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATTT---TTATTGCTGTG----- 825
Query 59680 TTGCGCTGCAATTCTTCGATTTCAGCGGCGTTGTCGATGATATCTGCCAT-TTTCCTT 59736
|||||||| |||||||| ||||| | || || ||||| |||||||| |||| ||
Sbjct 826 TTGCGCTGTAATTCTTCTATTTCTGATGCTGAATCAATGATGTCTGCCATCTTTCATT 883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194892274642096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |