Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08]
227 sequences; 9,374,785 total letters
Query= NC_000924.1
Length=61670
Score E
Sequences producing significant alignments: (Bits) Value
seq95 679 0.0
>seq95
Length=1024
Score = 679 bits (752), Expect = 0.0
Identities = 400/416 (96%), Gaps = 0/416 (0%)
Strand=Plus/Plus
Query 4828 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 4887
|||| | ||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 609 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 668
Query 4888 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 4947
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 728
Query 4948 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCACACTCACAACAATGAGTGGCAGATAT 5007
| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 729 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTGGCAGATAT 788
Query 5008 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCAATTTC 5067
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 789 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTC 848
Query 5068 TGATGCTGAATCAATGAGGTCTGCCATCTTTCATTAATCCCTGAATTGTTGGTTAATACG 5127
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 849 TGATGCTGAATCAATGATGTCTGCCATCTTTCATTAATCCCTGAACTGTTGGTTAATACG 908
Query 5128 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 5187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 968
Query 5188 CATGTTCACCGTTCCTTAAAGACGCCGTTTAACATGCCGATCGCCAGACTTAAATG 5243
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 969 CATGTTCATCGTTCCTTAAAGACGCCGTTTAACATGCCGATTGCCAGGCTTAAATG 1024
Score = 269 bits (298), Expect = 1e-67
Identities = 231/283 (82%), Gaps = 17/283 (6%)
Strand=Plus/Plus
Query 60152 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 60211
|||| | ||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 609 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 668
Query 60212 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 60271
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 728
Query 60272 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCACACTCGCAACAATGAGTAGCAGATGG 60331
| ||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||
Sbjct 729 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTGGCAGATAT 788
Query 60332 GGCAT-----TACTATCGG---ATTTGTATTTTTGCAGGGAGAGATTGCGCTGCAATTCT 60383
|| | | | ||| |||| || |||| | | |||||||| ||||||
Sbjct 789 AGCCTGGTGGTTCAGGCGGCGCATTT---TTATTGCTGTG-----TTGCGCTGTAATTCT 840
Query 60384 TCGATTTCAGCGGCGTTGTCGATGATATCTGCCAT-TTTCCTT 60425
|| ||||| | || || ||||| |||||||| |||| ||
Sbjct 841 TCTATTTCTGATGCTGAATCAATGATGTCTGCCATCTTTCATT 883
Score = 176 bits (194), Expect = 2e-39
Identities = 109/117 (93%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 4520 TGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 4579
||||| |||||||||||||||||| ||||| || || |||||||| ||||||||||||||
Sbjct 433 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 492
Query 4580 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 4636
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 493 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 549
Score = 152 bits (168), Expect = 2e-32
Identities = 104/117 (89%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 59844 TGCTGCTCCCAGCTCCACTCTCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 59903
||||| | | ||||| || | ||| ||||| || || |||||||| ||||||||||||||
Sbjct 433 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 492
Query 59904 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 59960
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 493 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 197221868362368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |