Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08] 227 sequences; 9,374,785 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq95 1824 0.0 >seq95 Length=1024 Score = 1824 bits (2022), Expect = 0.0 Identities = 1019/1024 (99%), Gaps = 0/1024 (0%) Strand=Plus/Plus Query 29739 CCCGATGTTTGAGTACGGTCATCATCTGACACTACAGACTCTGGCATCGCTGTGAAGACG 29798 |||||||||||||||||| || |||||||||||||||||||||||||||||| |||||| Sbjct 1 CCCGATGTTTGAGTACGGGCAACATCTGACACTACAGACTCTGGCATCGCTGGAAAGACG 60 Query 29799 ACGCGAAATTCAGCATTTTCACAAGCGTTATCTTTTACAAAACCGATCTCACTCTCCTTT 29858 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 61 ACGCGAAATTCAGCATTTTCACAAGCGTTATCGTTTACAAAACCGATCTCACTCTCCTTT 120 Query 29859 GATGCGAATGCCAGCGTCAGACATCATATGCAGATACTCACCTGCATCCTGAACCCATTG 29918 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GATGCGAATGCCAGCGTCAGACATCATATGCAGATACTCACCTGCATCCTGAACCCATTG 180 Query 29919 ACCTCCAACCCCGTAATAGCGATGCGTAATGATGTCGATAGTTACTAACGGGTCTTGTTC 29978 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ACCTCCAACCCCGTAATAGCGATGCGTAATGATGTCGATAGTTACTAACGGGTCTTGTTC 240 Query 29979 GATTAACTGCCGCAGAAACTCTTCCAGGTCACCAGTGCAGTGCTTGATAACAGGAGTCTT 30038 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GATTAACTGCCGCAGAAACTCTTCCAGGTCACCAGTGCAGTGCTTGATAACAGGAGTCTT 300 Query 30039 CCCAGGATGGCGAACAACAAGAAACTGGTTTCCGTCTTCACGGACTTCGTTGCTTTCCAG 30098 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CCCAGGATGGCGAACAACAAGAAACTGGTTTCCGTCTTCACGGACTTCGTTGCTTTCCAG 360 Query 30099 TTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATACTCACGCTGCTCGTT 30158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATACTCACGCTGCTCGTT 420 Query 30159 GAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATC 30218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATC 480 Query 30219 CTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAG 30278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 CTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAG 540 Query 30279 TTCCAGCACAATCGATGGTGTTACCAATTCATGGAAAAGGTCTGCGTCAAATCCCCAGTC 30338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TTCCAGCACAATCGATGGTGTTACCAATTCATGGAAAAGGTCTGCGTCAAATCCCCAGTC 600 Query 30339 GTCATGCATTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTC 30398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 GTCATGCATTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTC 660 Query 30399 GAACCTCTCTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAA 30458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 GAACCTCTCTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAA 720 Query 30459 CCCTGAACGACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTG 30518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 CCCTGAACGACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTG 780 Query 30519 GCAGATATAGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCT 30578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 GCAGATATAGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCT 840 Query 30579 TCTATTTCTGATGCTGAATCAATGATGTCTGCCATCTTTCATTAATCCCTGAACTGTTGG 30638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 TCTATTTCTGATGCTGAATCAATGATGTCTGCCATCTTTCATTAATCCCTGAACTGTTGG 900 Query 30639 TTAATACGCTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATT 30698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 TTAATACGCTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATT 960 Query 30699 TTGCTTTTCATGTTCATCGTTCCTTAAAGACGCCGTTTAACATGCCGATTGCCAGGCTTA 30758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 TTGCTTTTCATGTTCATCGTTCCTTAAAGACGCCGTTTAACATGCCGATTGCCAGGCTTA 1020 Query 30759 AATG 30762 |||| Sbjct 1021 AATG 1024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155084381949536