Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08] 227 sequences; 9,374,785 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq13 390 2e-103 seq8 174 2e-38 >seq13 Length=271150 Score = 390 bits (432), Expect = 2e-103 Identities = 1375/2138 (64%), Gaps = 29/2138 (1%) Strand=Plus/Plus Query 70790 CCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849 ||||||| | |||||||||||||| || | || |||| ||||| || |||||||| | Sbjct 87830 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87889 Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTA 70908 | || |||| || |||| || ||||| |||||||| || | ||| |||| | Sbjct 87890 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTT- 87948 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 ||| | | |||||| |||| ||||||| ||||||||| ||||| || || ||| Sbjct 87949 GGAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCA 88008 Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028 ||||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| Sbjct 88009 GCCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGT 88068 Query 71029 TCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 | || || | ||| | ||| ||||| || || |||| ||| || |||||| Sbjct 88069 TGCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTC 88128 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || | || | ||| | || || | | | | | | ||||||||| | | Sbjct 88129 ATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATT 88188 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 ||||||||||||| ||||| | || | ||| || || || || ||||| | || Sbjct 88189 TGAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACAC 88248 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 || || | |||| |||||| | |||||| ||||| ||||||||||| || | | || | Sbjct 88249 TCGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCA-ACGA 88307 Query 71266 -TTTCTAAGACCATGTG-ATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 ||||| | ||| |||| | || || |||| || |||||||| | ||| || || | Sbjct 88308 GTTTCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAG 88366 Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383 | || ||||| | | || || ||| Sbjct 88367 AGGGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGA 88426 Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAAT 71443 | || ||||| | |||||||| |||||| ||| || || || ||| ||| | Sbjct 88427 AGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGT 88486 Query 71444 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT 71503 | || ||||| ||||||| |||| || | || ||||| || |||||| ||| Sbjct 88487 AGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTC 88546 Query 71504 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563 | || ||||| || || ||||| |||||||| || | | | |||||||| | | | Sbjct 88547 TCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCA 88606 Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623 |||| || | ||||||||||| || ||| |||| | || |||||| | || | | Sbjct 88607 TATTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGT 88666 Query 71624 TTCTGACTATT-ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC-------- 71674 | | || || |||||| | || | || || ||| | | | | Sbjct 88667 TAC-GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTA 88725 Query 71675 -CATCTATTACAAACACG--TTCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCA 71730 |||| || ||| | | | ||| |||| ||| |||| ||||| || || ||| Sbjct 88726 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCT 88785 Query 71731 TTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790 | | | |||| | ||||||| |||||| ||| | || ||| || || Sbjct 88786 TCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAG 88845 Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850 || | || ||| | ||||||||||| ||||||||||| || || || |||||||||||| Sbjct 88846 TTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTT 88905 Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTA 71909 || | || | || | || || | ||| | | | || || || | | |||| | Sbjct 88906 TCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCA 88965 Query 71910 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTC 71969 | || || |||||||| | || ||| || || || ||||| | | | | | Sbjct 88966 CGACCTTCCT-TTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGC 89024 Query 71970 TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTT 72029 | |||||| |||| | ||| | | || | ||| || |||| | | ||||| ||| Sbjct 89025 AAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTT 89084 Query 72030 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089 ||| || |||||||| ||||| | ||| |||| ||||| | ||| |||||| || Sbjct 89085 CATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTT 89144 Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149 || ||||| || ||| | ||| || | || || | |||||| || |||||||| Sbjct 89145 ACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTA 89204 Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209 | || | | || || |||||||| || || || || | || | ||| ||||| || Sbjct 89205 CAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTT 89264 Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269 | || |||| |||||||||||||||||| || | ||| || || || | || ||| Sbjct 89265 GAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGA 89324 Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 ||| ||||||||||||| ||| | ||| ||||| || || |||| |||||||| Sbjct 89325 TCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAA 89384 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389 || ||| || || ||||| || ||||| || || |||||| |||| || || Sbjct 89385 AGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAA 89444 Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449 ||||| |||||||| | || || || || ||||| | |||||||| || || Sbjct 89445 GAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATG 89504 Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509 || || | || | | || | || || || |||||| || | | || || Sbjct 89505 AGTGAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACC 89564 Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569 ||| || || | || |||||||| | || || ||||| | ||| | | || ||| Sbjct 89565 ATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACCATT 89624 Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629 ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || |||||| Sbjct 89625 AATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAAGTC 89684 Query 72630 TCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 72689 || ||||| | |||| | || || || | ||| | ||| | || || | || Sbjct 89685 TCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTAAGT 89744 Query 72690 GATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAA 72747 | ||| |||| | ||||| ||||| || || || || || | || | | || Sbjct 89745 G--TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATACAAC 89802 Query 72748 TCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATT 72807 || | | || | | || | || | || | ||||||| ||| || || || ||| Sbjct 89803 TCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCAATT 89862 Query 72808 CTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCT 72867 || || || | |||||||||||| || || || || | ||| || | || || Sbjct 89863 CTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCAGCA 89922 Query 72868 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905 || || |||||| || || || ||||| || | ||| Sbjct 89923 GCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 89960 >seq8 Length=329253 Score = 174 bits (192), Expect = 2e-38 Identities = 576/883 (65%), Gaps = 16/883 (2%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| ||| || | |||||||| || || || || || |||| || || || Sbjct 320167 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 320108 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||| ||||| |||||| | || || || | ||||| |||| | | Sbjct 320107 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 320048 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 41952 | ||| || || | ||| || | ||| ||||| || ||||| || | |||| Sbjct 320047 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 319988 Query 41953 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 42011 | | |||||||| | || ||| | | || ||| || ||| || ||||| |||| Sbjct 319987 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 319930 Query 42012 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 42071 | | || |||| ||||| | | || |||||| ||| | ||| || || | Sbjct 319929 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 319870 Query 42072 AATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 42131 | || ||| | ||||| ||||| | ||| | || ||||| || || | || |||| Sbjct 319869 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 319810 Query 42132 TTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTT 42191 | || || | ||| || | ||| || ||||| ||||| ||||| ||||||||||| || | Sbjct 319809 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 319750 Query 42192 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-C 42247 | || || || ||||||| | | || | | ||| ||||| ||||| | Sbjct 319749 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 319690 Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 | || ||||| || ||||| | ||| | ||| || || || || |||||||| || || Sbjct 319689 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 319631 Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTATACATTTCTG 42365 | | || || |||||| | || ||||| |||| || || || | || | Sbjct 319630 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 319573 Query 42366 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTA 42425 | |||||||| || || ||||| || ||||| || ||| | || |||| || || | Sbjct 319572 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 319513 Query 42426 CTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAA 42485 | || | || || ||| | || ||||| || || || |||||| ||| ||||| | Sbjct 319512 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 319453 Query 42486 ACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTA-ATTTATTCCAATCAT 42542 | || | || || || ||||||| | || | || |||||||| |||| Sbjct 319452 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 319393 Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602 | ||| ||| | |||| ||| || | |||||||| || ||||| |||| || | Sbjct 319392 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 319333 Query 42603 ACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 |||| | ||||||||| || || | | ||||| | ||||| Sbjct 319332 ACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAA 319290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137295642520