Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08]
227 sequences; 9,374,785 total letters
Query= NC_004813.1
Length=57930
Score E
Sequences producing significant alignments: (Bits) Value
seq95 643 4e-180
>seq95
Length=1024
Score = 643 bits (712), Expect = 4e-180
Identities = 392/416 (94%), Gaps = 0/416 (0%)
Strand=Plus/Plus
Query 3628 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 3687
|||| | ||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 609 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 668
Query 3688 CTGTTTACTGATAAGCTCCAGCTCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 3747
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 669 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 728
Query 3748 TGCCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTTGCGGATAC 3807
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 729 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTGGCAGATAT 788
Query 3808 AGTCTGGTAGTTCAGGCGACGCATTTTTATTGCTGTATTGCGCTGTAATTCTTCAATTTC 3867
|| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct 789 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTC 848
Query 3868 TGATGCTGAATCAATGATATCTGCCATCTTTCATTAATCCCTGAATTGTTGGTTAATACG 3927
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 849 TGATGCTGAATCAATGATGTCTGCCATCTTTCATTAATCCCTGAACTGTTGGTTAATACG 908
Query 3928 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 3987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 968
Query 3988 CATGTTCACCGTTCCTTAAAGACGCCGTTTAACATACCGATTGCCAGACTTAAGTG 4043
|||||||| |||||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct 969 CATGTTCATCGTTCCTTAAAGACGCCGTTTAACATGCCGATTGCCAGGCTTAAATG 1024
Score = 176 bits (194), Expect = 2e-39
Identities = 109/117 (93%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 3320 TGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 3379
||||| |||||||||||||||||| ||||| || || |||||||| ||||||||||||||
Sbjct 433 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 492
Query 3380 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 3436
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 493 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 185253900623608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |