Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08] 227 sequences; 9,374,785 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq13 318 7e-82 seq8 197 2e-45 >seq13 Length=271150 Score = 318 bits (352), Expect = 7e-82 Identities = 1355/2141 (63%), Gaps = 35/2141 (2%) Strand=Plus/Plus Query 61984 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62043 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 87830 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87889 Query 62044 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62103 | || |||| || |||| || ||||| |||||||| || | ||| | | | Sbjct 87890 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 87949 Query 62104 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62163 || | | || || |||| || ||| ||||||||| ||||| || || |||| Sbjct 87950 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 88009 Query 62164 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62223 |||| | || || |||||||| | ||| ||||||| ||| || |||| | |||| | Sbjct 88010 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 88069 Query 62224 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280 || || | ||| | ||| ||||| || || |||| || || ||| || | Sbjct 88070 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 88129 Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62340 | | ||| | ||| | || || | | | | | | |||||||| | || Sbjct 88130 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 88189 Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400 |||||||||||| ||||| | || | ||| || || || || ||||| | ||| Sbjct 88190 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 88249 Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62460 | || | |||| |||||| | |||||| ||||| ||||||||||| || | || | Sbjct 88250 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 88309 Query 62461 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 62520 |||| | ||| | || || |||| || | |||||| | ||| || || || | Sbjct 88310 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 88369 Query 62521 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 62580 | ||| | ||| || | | || || ||| | | Sbjct 88370 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 88429 Query 62581 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 62640 | ||||| | |||||| | | |||| ||| || || || || | | || | Sbjct 88430 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 88489 Query 62641 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 62700 | ||||| || |||| |||| || | || ||||| | |||||| ||| | | Sbjct 88490 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 88549 Query 62701 AGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62760 | ||||| || || ||||| ||||||||||| | | | |||||||||| | | ||| Sbjct 88550 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 88609 Query 62761 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62820 | || | ||||||||||| || ||| |||| | || |||||| | || | || | Sbjct 88610 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 88669 Query 62821 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---------CAT 62871 || |||||| | || | ||| || ||| | | | | ||| Sbjct 88670 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 88729 Query 62872 CTATTACAAACATG--TTCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 62928 | || ||| | | | ||| |||| ||| |||| ||||| || || ||| | | Sbjct 88730 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 88789 Query 62929 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTT 62988 | |||| | || ||| |||||| ||| | || || || || || | Sbjct 88790 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 88849 Query 62989 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 63048 || ||| | ||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 88850 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 88909 Query 63049 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC- 63107 | || | || | || || | ||| | | | || || || | ||||| | | Sbjct 88910 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 88965 Query 63108 ---CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 63164 | ||| |||||||| | |||||| || || || ||||| | || | | | Sbjct 88966 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 89025 Query 63165 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63224 | |||||| |||| ||| | | || | ||| || || | | | |||| |||| Sbjct 89026 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 89085 Query 63225 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63284 || || |||||||| ||||| | ||| |||| ||||| | ||| ||||| || Sbjct 89086 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 89145 Query 63285 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63344 || ||||| || ||| | ||| || | || || | |||||| || |||||||| Sbjct 89146 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 89205 Query 63345 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63404 | || | | ||||| |||||||| || || || || | || | ||| ||||| || Sbjct 89206 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 89265 Query 63405 TAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTT 63464 | || |||| ||||||||||||||| || || |||| || ||||| | || ||| | Sbjct 89266 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 89325 Query 63465 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63524 || |||||||||||||| ||| | ||| ||||| || || |||| |||||||| Sbjct 89326 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 89385 Query 63525 GCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGA 63584 || ||| || || || || || || || || || ||||| |||| || || Sbjct 89386 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 89445 Query 63585 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63644 ||||| |||||||| | || || || || ||||| | |||||||| || || Sbjct 89446 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 89505 Query 63645 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63700 || || | || ||| |||| || || || |||||| || | || || Sbjct 89506 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 89561 Query 63701 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63760 |||||| || | || |||||||| | || ||| ||||| | ||| | | || Sbjct 89562 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 89621 Query 63761 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 63820 || ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || ||| Sbjct 89622 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 89681 Query 63821 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCAT 63880 ||||| ||||| | |||| | ||||| || | ||| | ||| | || || | Sbjct 89682 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGTTGTA 89741 Query 63881 GGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAAT 63938 ||| ||| |||| | ||||| ||||| || || || || || | || | | Sbjct 89742 AGTG--TCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATAC 89799 Query 63939 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCT 63998 || || | | || | | || | || | || | ||||||| ||| || || || Sbjct 89800 AACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGCA 89859 Query 63999 ATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCG 64058 ||||| || || | |||||||||||| || || || || | ||| || | || Sbjct 89860 ATTCTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTCA 89919 Query 64059 GCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 64099 || || || |||||| || || || ||||| || | ||| Sbjct 89920 GCAGCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 89960 >seq8 Length=329253 Score = 197 bits (218), Expect = 2e-45 Identities = 566/856 (66%), Gaps = 16/856 (2%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||| || | |||||||| || || ||||| || |||| || || || Sbjct 320167 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 320108 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| ||||| |||||| | || || || | ||||| |||| | | Sbjct 320107 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 320048 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 33191 | ||| || || ||||| || | ||| ||||| || ||||| || | |||| Sbjct 320047 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 319988 Query 33192 TTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 33250 | | |||||||| | || ||| | | || ||| || || || ||||| |||| Sbjct 319987 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 319930 Query 33251 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | | |||| |||| ||||| | | || |||||| ||| | ||| || || | Sbjct 319929 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 319870 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | || ||| | ||||||||||| | ||| || || ||||| || || | || |||| Sbjct 319869 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 319810 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | || || | ||| || | ||| || || ||||| || ||||| ||||||||||| || | Sbjct 319809 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 319750 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-C 33486 | || ||||| ||||||| | | || | | || | || ||| ||||| | Sbjct 319749 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 319690 Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546 | || ||||| || ||||| | ||| | ||| || || || || |||||||| || || Sbjct 319689 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 319631 Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCG 33604 | | || || |||||| | |||||||| |||| || || || | || | Sbjct 319630 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 319573 Query 33605 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 33664 | |||||||| || || ||||| || ||||| || ||| | || |||| || || | Sbjct 319572 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 319513 Query 33665 CTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 33724 | || | || || |||| |||| |||||||| || || |||||| ||| ||||| | Sbjct 319512 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 319453 Query 33725 ACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCAT 33781 | || | || || || ||||||| | | || | | |||||||| |||| Sbjct 319452 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 319393 Query 33782 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 33841 | ||| ||| | |||| ||| || | |||||||| || || || |||| || | Sbjct 319392 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 319333 Query 33842 ACATGTTCCAGATGTC 33857 |||| | |||||| || Sbjct 319332 ACATTTGCCAGATATC 319317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945432387320