Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08] 227 sequences; 9,374,785 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq13 358 8e-94 seq8 167 3e-36 >seq13 Length=271150 Score = 358 bits (396), Expect = 8e-94 Identities = 1365/2142 (64%), Gaps = 37/2142 (2%) Strand=Plus/Plus Query 61839 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 61898 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 87830 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 87889 Query 61899 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 61958 | || |||| || |||| || ||||| |||||||| || | ||| | | | Sbjct 87890 CAGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTG 87949 Query 61959 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62018 || | | || || |||| || ||| ||||||||| ||||| || || |||| Sbjct 87950 GAGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAG 88009 Query 62019 CCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62078 |||| | ||||| |||||||| | ||| ||||||| ||| || |||| | |||| | Sbjct 88010 CCATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTT 88069 Query 62079 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62135 || || | ||| | ||| ||||| || || |||| || || ||| || | Sbjct 88070 GCTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCA 88129 Query 62136 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62195 | | ||| | ||| | || || | | | | | | |||||||| | || Sbjct 88130 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 88189 Query 62196 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 62255 |||||||||||| ||||| | || | ||| || || || || ||||| | | ||| Sbjct 88190 GAAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACT 88249 Query 62256 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62315 | || | |||| |||||| | |||||| ||||| ||||||||||| || | || | Sbjct 88250 CGTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGT 88309 Query 62316 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 62375 |||| | ||| | || || |||| || | |||||| | ||| || || || | Sbjct 88310 TTCTTAAACCTGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 88369 Query 62376 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 62435 | ||| | ||| || | | || || ||| | | Sbjct 88370 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 88429 Query 62436 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 62495 | ||||| | |||||| | | |||| ||| || || || || | | || | Sbjct 88430 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 88489 Query 62496 TGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTA 62555 | ||||| || |||| |||| || | || ||||| | |||||| ||| | | Sbjct 88490 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGAATTCTCA 88549 Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615 | ||||| || || ||||| ||||||||||| | | | |||||||||| | | ||| Sbjct 88550 ACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATAT 88609 Query 62616 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62675 | || | ||||||||||| || ||| |||| | || |||||| | || | || | Sbjct 88610 TCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTAC 88669 Query 62676 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---------CAT 62726 || |||||| | || | ||| || ||| | | | | ||| Sbjct 88670 GAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGCAGTGAGTATCAT 88729 Query 62727 CTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 62783 | || ||| | | | || |||| ||| |||| ||||| || || ||| | | Sbjct 88730 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCG 88789 Query 62784 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 62843 | |||| | || ||| |||||| ||| | || ||| || || || | Sbjct 88790 GGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 88849 Query 62844 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 62903 || ||| | ||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 88850 TCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTTCTG 88909 Query 62904 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCT 62963 | || | || | || || | ||| | | | || || || | ||||| | | Sbjct 88910 TTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCTTCCA 88965 Query 62964 T----TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 63019 ||| |||||||| | |||||| || || || ||||| | || | | | Sbjct 88966 CGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGACGTCGGCA 89025 Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || |||||| |||| ||| | | || | ||| || || | | | |||| |||| Sbjct 89026 AGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTC 89085 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || || |||||||| ||||| | ||| |||| ||||| | ||| ||||| || Sbjct 89086 ATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCCTCTTTA 89145 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| || ||| | ||| || | || || | |||||| || |||||||| Sbjct 89146 CCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTAC 89205 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 | || | | ||||| |||||||| || || || || | || | ||| ||||| || Sbjct 89206 AAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTG 89265 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || |||| |||||||||||||||||| || ||||| || || || | || ||| | Sbjct 89266 AAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGAT 89325 Query 63320 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379 || |||||||||||||| ||| | ||| ||||| || || |||| |||||||| Sbjct 89326 CCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAA 89385 Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439 || ||| || || ||||| || ||||| || || |||||| |||| || || Sbjct 89386 GCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAG 89445 Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499 ||||| |||||||| | || || || || ||||| | |||||||| || ||| Sbjct 89446 AAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGA 89505 Query 63500 GTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63555 || || | || ||| |||| || || || |||||| || | || || Sbjct 89506 GTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAATGTCATC 89561 Query 63556 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63615 |||||| || | || |||||||| | || ||| ||||| | ||| | | || Sbjct 89562 ACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTACC 89621 Query 63616 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 63675 || ||| ||| | ||| ||| ||||||| || || || ||||| ||||| || ||| Sbjct 89622 ATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTATACTGAAA 89681 Query 63676 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 63735 ||||| ||||| | |||| | ||||| || | ||| | ||| | || | | | Sbjct 89682 GTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAATGT---T 89738 Query 63736 GGTAAT-ACTT--GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 63792 | | | ||| |||| | |||| | ||||| || || || || |||| || | | Sbjct 89739 GTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGTATTCATA 89798 Query 63793 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 63852 || || | | || | | || | || | || | |||||||| ||| || || || Sbjct 89799 CAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGGAAACAGC 89858 Query 63853 TATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 63912 ||||| || || | |||||||||||| || || || || | ||| || | || Sbjct 89859 AATTCTTGCTGCCAAAATGGCATAATCGGGGTGAATAGTGGTCATATAGGCAGCAGTCTC 89918 Query 63913 GGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954 || || || |||||| || || || |||||||| | ||| Sbjct 89919 AGCAGCAAGGTTGTCCAGCTCCACGGTAGTTACACCGTGATA 89960 >seq8 Length=329253 Score = 167 bits (184), Expect = 3e-36 Identities = 563/862 (65%), Gaps = 16/862 (2%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| ||| || | |||||||| || || |||||||| | || || || || Sbjct 320167 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 320108 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 |||||||| || ||||||||| | || || || | ||||| |||| | | Sbjct 320107 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 320048 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TAAG 32548 | ||| || || || || || | ||| ||||| || ||||| || | |||| Sbjct 320047 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 319988 Query 32549 TTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 32607 | | |||||||| | || ||| | | || ||| || ||| || ||||| |||| Sbjct 319987 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 319930 Query 32608 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 32667 | | || |||| ||||| | | || |||||| ||| | ||| || || | Sbjct 319929 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 319870 Query 32668 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 32727 | || ||||| ||||||||||| | ||| | || ||||| || || | || |||| Sbjct 319869 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 319810 Query 32728 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 32787 | || || | ||| || | ||| || || || ||||| ||||| |||||||| || || | Sbjct 319809 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 319750 Query 32788 CTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAA-CCGGCGCTGTCATGTATCCA-C 32843 | || || || ||||||| | | || | | || | || ||| ||||| | Sbjct 319749 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 319690 Query 32844 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGA 32903 | || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || || Sbjct 319689 TCATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 319631 Query 32904 TAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCG 32961 | | || || |||||| | || |||||||||| || || || | || | Sbjct 319630 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGA--GTAAGTCTCGG 319573 Query 32962 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTA 33021 | |||||||| || || || || || ||||| |||||| | || |||| || || | Sbjct 319572 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 319513 Query 33022 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 33081 | || | || || ||| | || |||||||| || || |||||| ||| ||||| | Sbjct 319512 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 319453 Query 33082 ACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTCCAATCAT 33138 | || | || || || ||||||| | | || | | |||||||| |||| Sbjct 319452 AGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCAT 319393 Query 33139 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 33198 | ||| ||| | || | ||| || | |||||||| || || || |||| || | Sbjct 319392 GCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGT 319333 Query 33199 ACATATTCCAGATGTCATGATA 33220 |||| | |||||| || || || Sbjct 319332 ACATTTGCCAGATATCGTGGTA 319311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630202069200