Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08]
227 sequences; 9,374,785 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq8 170 2e-37
seq7 82.4 9e-11
>seq8
Length=329253
Score = 170 bits (188), Expect = 2e-37
Identities = 583/901 (65%), Gaps = 17/901 (2%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||||| |||||||| || |||| | ||||| ||||| || || || || |
Sbjct 320180 CATGACACCTGCCTTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGC 320121
Query 92850 CAAAGATATCGAATTCACTA-GTGAT-TGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907
|||||| || | || | || | |||||| ||| |||| || ||||| |
Sbjct 320120 CAAAGAAATGTTCTCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCC 320061
Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967
|| | || || ||| ||||| || || || | ||||| ||||||| || ||
Sbjct 320060 CAGAGCTACCAGTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTT 320001
Query 92968 CATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGG 93026
||| || || ||| | ||||| |||||||| || ||| | ||| ||||| | || |
Sbjct 320000 CATCCCCAGTAAGGAG-ACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAG 319942
Query 93027 CTTCTTTCAAGATTTCTATTAC--TCTACTATTTGG---TGGTTTTTGTACGACATAATT 93081
| ||| | | || | | || | | || ||| | | ||| | || | |||
Sbjct 319941 CCTCTGTGATAATCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATA 319882
Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141
| | |||| |||||||| || ||||| || ||||||| | || | |||||||
Sbjct 319881 GCA-----AGCAAGCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGA 319827
Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201
||| || |||||||| | || |||| ||||| | ||| || || ||||||||| ||
Sbjct 319826 GAAGGTCAAACCTGGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCC 319767
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
||||| || ||||| || || || || || || || | |||||| || || |||
Sbjct 319766 TGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATC 319707
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | |||||| | | ||||| || || |||| || ||||| || | || ||
Sbjct 319706 GTCATCAGAAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTC 319647
Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381
||| || || || ||| | || ||| | | |||| ||||| ||||| || | ||
Sbjct 319646 GATGGCATTGAACAGGAATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAA 319587
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
|| || | || || || | |||||||| || ||||| ||||| || ||| | ||
Sbjct 319586 GGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGC 319527
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
||| | | || || || | || | || || | ||||||||||| ||||| ||
Sbjct 319526 TTCGGGAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTC 319467
Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTT---TAAG 93558
|| || ||||| || || | | | || || ||| |||| ||| | || |
Sbjct 319466 AGAGGCAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACG 319407
Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618
|||| ||| || | ||| || || || | ||| || |||||||||| || ||
Sbjct 319406 ATTATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGC 319347
Query 93619 TTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678
||| || | |||||||| | ||| || || || || | | || || | ||||||||
Sbjct 319346 TTCGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAAACG 319287
Query 93679 A 93679
|
Sbjct 319286 A 319286
>seq7
Length=367028
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/71 (89%), Gaps = 3/71 (4%)
Strand=Plus/Minus
Query 126272 TTGGCCGAGT-GGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAG-CGTGGGTT 126329
|||||||||| |||||||||||||||||| | | |||||| | ||| |||| ||||||||
Sbjct 189003 TTGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGT-CTCTCCGGAGGCGTGGGTT 188945
Query 126330 CGAACCCCACA 126340
|||||||||||
Sbjct 188944 CGAACCCCACA 188934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859219907480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |