Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08]
227 sequences; 9,374,785 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq13 172 7e-38
seq8 134 2e-26
>seq13
Length=271150
Score = 172 bits (190), Expect = 7e-38
Identities = 939/1474 (64%), Gaps = 53/1474 (4%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||||| ||||| || || || ||||| |||| ||||| ||||||| || ||
Sbjct 88219 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 88278
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| |||||||| ||||| | || | ||| | | ||| ||| |
Sbjct 88279 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 88338
Query 116023 TTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080
||||| | ||||| || | | | || | || | ||||||| ||| | || |
Sbjct 88339 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 88396
Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140
|| || || || ||||| || || | || || || || | || || | | || |
Sbjct 88397 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 88456
Query 116141 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 116200
||||| | || || | ||||| || || || || |||||||| || ||| |
Sbjct 88457 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 88516
Query 116201 CCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTT 116260
||||| || |||||||| | | | || ||||| |||| || | |||||
Sbjct 88517 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 88576
Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGA 116319
| ||||| | | || || | || | |||||| || | | ||| ||| | ||||
Sbjct 88577 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 88635
Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379
|||||||| || ||||||| || || | || || || || || |||||||||||
Sbjct 88636 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 88695
Query 116380 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 116433
|||||||| | | | | || |||| || || | ||| | ||||| ||
Sbjct 88696 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 88755
Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493
|| || |||| ||||| |||| ||||| ||| || ||| || | |||||| |
Sbjct 88756 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTC---A 88812
Query 116494 CA-CAAA--TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| |||| || || |||||| ||||||||||| || || | ||| |||||||
Sbjct 88813 CAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAA 88872
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|||||||| || ||||| |||| || || || || ||||| | || || || || | |
Sbjct 88873 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 88932
Query 116611 CATACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACTTTGT 116666
|| | | |||| | || ||| || || || |||| ||||| ||
Sbjct 88933 CAAAGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTC 88988
Query 116667 GTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGAC 116725
||| | ||||||| || || || | || | || | || || || || | | ||||
Sbjct 88989 GTACAATTCCTCAAATTCATCTCC-ATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAG 89047
Query 116726 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 116785
|||| || | ||| | ||| || || || | |||||||| || || |||||||| |
Sbjct 89048 AGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACA 89107
Query 116786 GCGCCGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844
|| | ||| | || | | | || || || | | || || || ||| | ||
Sbjct 89108 AAGCGGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCA 89166
Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGA 116904
| ||| | | ||| || || ||||| || |||| ||||| || | || || ||
Sbjct 89167 ATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAG---GA 89223
Query 116905 CG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958
|| |||| | |||| ||||| | || || ||| || || | | |||||||
Sbjct 89224 CGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGA 89283
Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGACATC 117017
|| ||||||| || || || || || ||| || | ||| ||| | | ||
Sbjct 89284 ATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGT-GGCACGAATATT 89342
Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077
|| ||||||| |||||| || || || || |||||| || || ||| | | | |
Sbjct 89343 ATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGT 89402
Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137
|||| || || || || |||||| || | || | | ||| || ||||||||
Sbjct 89403 ATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTG 89462
Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 117197
||| || ||||||||||| || || || || | || || |||| |||| || ||
Sbjct 89463 TGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATAC-TTCTGA 89520
Query 117198 CATCTTATCGT---AGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254
| || || || | || || | || | |||||| || || ||||| ||||| |
Sbjct 89521 C-TCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGC 89579
Query 117255 GACCCGCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGG 117312
|| ||||||| || || ||| || ||| || || |||||| | ||| | |||
Sbjct 89580 AACACGCATAATCAAGTGTTGAGGACGTTCTGCAACAT--TACCATTAATTCTCAGAAGG 89637
Query 117313 TAAC-TCTTCTCCAAGGTCTTGAGACCAAAATAG 117345
||| |||| ||||||||||||| ||||| |||
Sbjct 89638 TAAGATCTT-TCCAAGGTCTTGAATCCAAAGTAG 89670
>seq8
Length=329253
Score = 134 bits (148), Expect = 2e-26
Identities = 388/587 (66%), Gaps = 25/587 (4%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| | |||||||| | | | || || ||||| |||||| || |||
Sbjct 319874 AGCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACC 319815
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
|||||||||||| | ||||||||||||||| || | | ||| || || || ||||||||
Sbjct 319814 TGGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGAT 319755
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATC-- 127695
||||| ||| ||||| |||| | ||| || || || | | | || |||
Sbjct 319754 ACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGC----GAACAATGCATCGTCATCAG 319699
Query 127696 -AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-T 127753
|| ||| |||| ||||| | ||||||| | ||||||||| | ||||| ||| || |
Sbjct 319698 AAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCAT 319639
Query 127754 TCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAAT 127811
| | | || ||| | ||| ||||||||||||||| |||| || || || |
Sbjct 319638 TGAACAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGT 319582
Query 127812 ATGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 127870
| || ||| ||| | | | ||| || | ||| | |||| || | ||||||
Sbjct 319581 AAGTCTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCG 319523
Query 127871 CTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 127930
| || |||||| | ||||| | | || ||| ||||| || || ||
Sbjct 319522 GGAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAG 319463
Query 127931 CCAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GG 127984
||||||| || || |||| | | | | |||||| |||||| ||||||| |
Sbjct 319462 GCAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGA 319406
Query 127985 GTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATT 128044
| |||||||| | | |||||| || |||| ||||| ||||||||| | |
Sbjct 319405 TTATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCT 319346
Query 128045 TGAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 128091
| |||| ||| || | || ||||| | | | ||||||| |||||
Sbjct 319345 TCGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 319299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505459173320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |