Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08] 227 sequences; 9,374,785 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq13 246 4e-60 >seq13 Length=271150 Score = 246 bits (272), Expect = 4e-60 Identities = 962/1498 (64%), Gaps = 41/1498 (3%) Strand=Plus/Plus Query 109725 AAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTC 109784 |||||| ||||| | | || || ||||||||| | ||||| |||||||||||||| Sbjct 88191 AAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTC 88250 Query 109785 ATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844 |||| || || ||||| | ||| ||||| |||||||| || || | || | ||| Sbjct 88251 GTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTT 88310 Query 109845 TCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGT----CCCAATCATAACGACCAC 109900 || | ||| | | || || || ||| || |||| || | || | Sbjct 88311 TCTTAAACCTGTGGAA---ACAATCTTG-GCTTTGAGTGATTCCCATTC----CCACAGC 88362 Query 109901 TAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAAC 109960 | | | || ||||||| || ||| | | |||| || || ||||||| Sbjct 88363 TCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAAC 88420 Query 109961 CCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCG 110020 | | ||| | ||||| | || || | |||| || ||| || || || | || | Sbjct 88421 CTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTG 88480 Query 110021 CATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGG 110080 |||| || ||||| |||||||| ||| ||| | | | ||| | | || || | Sbjct 88481 CATGGTAGATAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAG 88540 Query 110081 GAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGAT 110140 ||| | | ||||| |||| |||| ||| |||||||| | | | || || | || Sbjct 88541 GAATTCTCAACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTAT 88600 Query 110141 GCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCC 110197 ||| || || | | ||| |||| ||||||||||| || | |||||| | | Sbjct 88601 TACGCATATTCGATCTCCTAGC---TTCTGGAACGGGGTAAAAATTTCTGTCGATAATTC 88657 Query 110198 GATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTT- 110256 || | || || || || ||||||||||| || || || | | | || Sbjct 88658 TGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGTTGTACCAGC 88717 Query 110257 --TTCGTCTCCT---TATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAG 110311 | || || | | | ||| | || ||||||||||| || | || || |||| Sbjct 88718 AGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAG 88777 Query 110312 AAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGA 110371 |||||| || | | |||||| | |||||| || | ||| || ||||||| Sbjct 88778 CAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGA 88837 Query 110372 CACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGG 110431 |||||||||||||||| || | ||| ||| || ||||||||||| |||||| |||| | Sbjct 88838 CACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAG 88897 Query 110432 TACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTG 110491 |||||||||| || |||| || || ||||| | ||| | | ||| || ||| Sbjct 88898 TACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTT 88957 Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551 | | ||||||||| ||||| | |||||| ||||||||||| | ||| || | Sbjct 88958 GTCTTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAATTCATCTCCATAGA 89017 Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611 | || | ||| || || | ||| |||| |||| ||||| ||| || || | Sbjct 89018 CGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTA 89077 Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCC 110670 | || ||||||||||| ||||| ||||||| || | ||| | ||| | || || | Sbjct 89078 CTCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGA-TC 89136 Query 110671 TCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGT 110730 || || | ||| ||||| || | || | ||| | | ||| || | |||||||| Sbjct 89137 TCCTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGC 89196 Query 110731 TCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGT 110784 || | || | ||| | || | | |||| ||| | |||| |||||| || Sbjct 89197 TCCAAGTACAAAGCAA---ATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGA 89253 Query 110785 GCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCC 110844 || ||| ||||||||||| | ||| |||||||| |||| || ||| || ||||| Sbjct 89254 GCAGTGTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCA 89313 Query 110845 CTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCAC 110904 ||| ||| |||||||||| | || || |||| |||||| ||||| || Sbjct 89314 GCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTT 89373 Query 110905 TTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTG 110964 || ||| ||||| || | | ||| | ||||| || ||||| || || || Sbjct 89374 TTGGAGATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGC 89433 Query 110965 TTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTA 111024 |||||| || || || || ||||| || || |||| || || || || || || ||| Sbjct 89434 ATGGCAACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTA 89493 Query 111025 GGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGG 111083 || | |||||| |||| | || | || ||| ||| || || || | | | Sbjct 89494 GGAGAGGCATGAGTGAA-ATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGC 89552 Query 111084 TACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGAT 111143 | || | ||| ||||| || || ||||| ||||| | || | |||||| ||| Sbjct 89553 AATGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGC 89612 Query 111144 TAGCTTTCCATCAACACGCTGAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200 | || |||| || | | |||||||| |||| || | |||||||| |||||||| Sbjct 89613 AACATTACCATTAATTCTCAGAAGGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 89669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974328780600