Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08] 227 sequences; 9,374,785 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq8 176 5e-39 >seq8 Length=329253 Score = 176 bits (194), Expect = 5e-39 Identities = 312/455 (69%), Gaps = 0/455 (0%) Strand=Plus/Minus Query 37155 TTTAAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATC 37214 ||||||| ||| | || || ||||| ||| ||||| || || ||||| | || Sbjct 319897 TTTAAATGAGAAAATAGCAAGCAAGCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATA 319838 Query 37215 AATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCT 37274 | ||||| || ||||| || |||||||| | |||||| || || | ||| || || | Sbjct 319837 AGCTCATTGGAGAAGGTCAAACCTGGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAA 319778 Query 37275 GCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCG 37334 ||||||||||| |||||||| ||||| ||||| || || || || || | |||| | || Sbjct 319777 GCAAAAGATCCTGAAAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCG 319718 Query 37335 AAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACAT 37394 || || | | ||||||||||||| | | | ||| || |||||| ||| | |||| Sbjct 319717 AACAATGCATCGTCATCAGAAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACAT 319658 Query 37395 TCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTA 37454 ||| || || || || || || || || | |||| |||| | || |||||| Sbjct 319657 GGAATGGTCTCGATGGCATTGAACAGGAATTCAGACTCTTTTGGATCTTTGATGTAAGTA 319598 Query 37455 TCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAA 37514 ||||| || || || | || |||||||| || || || ||||| ||||| ||| Sbjct 319597 TCAATCAGCAAGGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAA 319538 Query 37515 AAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTA 37574 || || | ||||| | | |||||| || | || | | | ||||||||||| Sbjct 319537 AAGCATTTTGCTTCGGGAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTG 319478 Query 37575 ACTATCCCATCACTAGCTGCAAAGAAAGCAAGAAC 37609 || || || ||| || |||||||| ||||| || Sbjct 319477 ACAATACCGTCAGAGGCAGCAAAGAAGGCAAGGAC 319443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592315119301080