Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08] 227 sequences; 9,374,785 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq95 673 0.0 >seq95 Length=1024 Score = 673 bits (746), Expect = 0.0 Identities = 399/416 (96%), Gaps = 0/416 (0%) Strand=Plus/Plus Query 3687 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 3746 |||| | ||||||| |||||||||||||||| | ||||||||||||||||||||||||| Sbjct 609 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 668 Query 3747 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 3806 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 669 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 728 Query 3807 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCACACTCGCAACAATGAGTGGCAGATAT 3866 | ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| Sbjct 729 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTGGCAGATAT 788 Query 3867 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCAATTTC 3926 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 789 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTC 848 Query 3927 TGATGCTGAATCAATGAGGTCTGCCATCTTTCATTAATCCCTGAATTGTTGGTTAATACG 3986 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct 849 TGATGCTGAATCAATGATGTCTGCCATCTTTCATTAATCCCTGAACTGTTGGTTAATACG 908 Query 3987 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 4046 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 909 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 968 Query 4047 CATGTTCACCGTTCCTTAAAGACGCCGTTTAACATGCCGATCGCCAGACTTAAATG 4102 |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 969 CATGTTCATCGTTCCTTAAAGACGCCGTTTAACATGCCGATTGCCAGGCTTAAATG 1024 Score = 158 bits (174), Expect = 4e-34 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 3379 TGCTGCTCCCAGCTCAACTCTCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 3438 ||||| | | |||||||| | ||| ||||| || || |||||||| |||||||||||||| Sbjct 433 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 492 Query 3439 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 3495 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 493 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184444302805986