Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08]
227 sequences; 9,374,785 total letters
Query= NC_027984.1
Length=57677
Score E
Sequences producing significant alignments: (Bits) Value
seq95 673 0.0
>seq95
Length=1024
Score = 673 bits (746), Expect = 0.0
Identities = 399/416 (96%), Gaps = 0/416 (0%)
Strand=Plus/Plus
Query 3687 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 3746
|||| | ||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 609 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 668
Query 3747 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 3806
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 728
Query 3807 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCACACTCGCAACAATGAGTGGCAGATAT 3866
| ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 729 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTGGCAGATAT 788
Query 3867 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCAATTTC 3926
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 789 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTC 848
Query 3927 TGATGCTGAATCAATGAGGTCTGCCATCTTTCATTAATCCCTGAATTGTTGGTTAATACG 3986
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 849 TGATGCTGAATCAATGATGTCTGCCATCTTTCATTAATCCCTGAACTGTTGGTTAATACG 908
Query 3987 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 4046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 968
Query 4047 CATGTTCACCGTTCCTTAAAGACGCCGTTTAACATGCCGATCGCCAGACTTAAATG 4102
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 969 CATGTTCATCGTTCCTTAAAGACGCCGTTTAACATGCCGATTGCCAGGCTTAAATG 1024
Score = 158 bits (174), Expect = 4e-34
Identities = 105/117 (90%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 3379 TGCTGCTCCCAGCTCAACTCTCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 3438
||||| | | |||||||| | ||| ||||| || || |||||||| ||||||||||||||
Sbjct 433 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 492
Query 3439 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 3495
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 493 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 184444302805986
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |