Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08]
227 sequences; 9,374,785 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq8 259 4e-64
>seq8
Length=329253
Score = 259 bits (286), Expect = 4e-64
Identities = 584/869 (67%), Gaps = 23/869 (3%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|||||||| || || |||| |||||||||||| || ||||| || | || ||||| ||
Sbjct 320167 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 320108
Query 4317 TCCATAAAATCAAACGGATTAGTTG-CGTTGTA-ATGTTTTTCACACTTTAGAGCTACAA 4374
||||| || ||||| ||||| |||| ||||||| | ||||| | |||||||| |
Sbjct 320107 TCCATGAAGTCAAATGGATT-GTTGACGTTGTACACCTTTTTGTTGC-CCAGAGCTACCA 320050
Query 4375 GCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA 4434
| | || |||||| || || || | |||||||| ||| | |||||| || || | ||
Sbjct 320049 GTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTA 319990
Query 4435 ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494
| ||||| || |||| ||| || || || ||| || || || |||||||| |
Sbjct 319989 AGGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAA 319930
Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554
| | || | | || | | | | |||| ||| | ||| | || || ||||
Sbjct 319929 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 319870
Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614
| ||| || || || |||||||||| ||| || || || || || || || || ||||
Sbjct 319869 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 319810
Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674
| | ||||||||| || | ||| || |||| ||||| || || |||||||| || || |
Sbjct 319809 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 319750
Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTT---TAATCC 4731
| || || || || || || || || ||||| | || | ||| | |||||
Sbjct 319749 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAA---TGCATCGTCATCAGAAATCC 319693
Query 4732 ATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA-- 4789
|| | | ||||||| ||| |||| || | || ||||| || | || || || ||
Sbjct 319692 ATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACA 319633
Query 4790 -TAATT--TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACAT 4846
|||| ||| ||| ||| |||| || ||||| || || || | | || |
Sbjct 319632 GGAATTCAGACTCTTT-----TGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGT 319578
Query 4847 TTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTAC 4906
|| || || || || || || ||||| || |||||||||||| | ||||| | |
Sbjct 319577 CTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAG 319518
Query 4907 TTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGC 4966
|||||| || || || |||| || |||||||| || || ||||||||| ||| ||
Sbjct 319517 TTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGC 319458
Query 4967 AAAAAACGCCAAAACATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGTTTTTTCCA 5023
||| || || | || || || ||| | | ||| || | || | || |||||
Sbjct 319457 AAAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCA 319398
Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTT 5083
|| ||||||| ||| | || | ||| ||| |||||||||| || ||||| || |
Sbjct 319397 GTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTG 319338
Query 5084 TTTGTACATAGACCAAATATCAGGATACT 5112
|||||||| ||| ||||| | ||||
Sbjct 319337 CTTGTACATTTGCCAGATATCGTGGTACT 319309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427048418540591
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |