Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08] 227 sequences; 9,374,785 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq61 206 7e-49 >seq61 Length=5831 Score = 206 bits (228), Expect = 7e-49 Identities = 740/1140 (65%), Gaps = 23/1140 (2%) Strand=Plus/Plus Query 9316 CAGAGCAAAAGCTGGCGATGGTTCGCGAGAGCCTTGAGCCAGGACACAGCGTTTCGGTGG 9375 || || ||||| | || || |||| ||||| |||| || || | || || | | Sbjct 1205 CACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCG 1264 Query 9376 TGGCCCGGCGCAACGGCGTCAATGCCAATCAACTATTTCACTGGCGCAAGCTTTACCAGG 9435 | ||||||| | || || |||| || |||||| |||||| |||| ||||||| Sbjct 1265 TTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGG 1324 Query 9436 ACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAGCCGTGGTGCCTGCGTCCGAGTTGAGCG 9495 | |||||| | | || ||| |||||| ||| || || ||||| || || | | Sbjct 1325 AAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTG 1384 Query 9496 ATGCGCTCAGGCAGATTCGTGAGCTACAACGGATGCTGGGCAAGAAGACGATGGAAGCCG 9555 || | | ||||||| || || || || |||| |||||||| ||||||||| | Sbjct 1385 CCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATG 1444 Query 9556 AAGTCCTCAAAGAGGCCGTGGAGATA-GCCCGCTCGCGAAAATGGATTGCGCACTCACCC 9614 || |||||||||| ||||| || ||| | || | ||| ||||| |||||| | ||| Sbjct 1445 AACTCCTCAAAGAAGCCGTTGA-ATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCC 1503 Query 9615 TTGTTGCCGGGGGACGGTCAGTGAAACTGGTCAGTGAATGTCTCGGTGTGGCGCGCTCGC 9674 || ||||| ||||| || ||| | | ||||| |||||| | ||| |||| ||| Sbjct 1504 TTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGC 1563 Query 9675 AATTAACGGTTCGACTCAAACAATCGGTATCGCCCAAAATACGGCGGC-GCAGGC----C 9729 | || || |||| || | | | || | | | ||| || |||| | | Sbjct 1564 AGTTGCACGTCATTCTCAGACGAACCG-ATGACTGGATGGATGGCCGCCGCAGTCGTCAC 1622 Query 9730 GATGAACGATACGGAGCT-CGTCGCTGAAATCCAGCAACAAGTCAGCGAACTGCCCAGCT 9788 ||| |||||||| | | || | | | | || || || | || ||||| | | Sbjct 1623 ACTGAT-GATACGGATGTGCTTCTCCGTA-TACACCATGTTATCGGAGAGCTGCCAACGT 1680 Query 9789 ACGGTTACCGCCGTGTTTGGGGATTGCTGCGCCGCGCGCGCGAAAAGCAGTCGCTGCCCG 9848 | ||||| || || || |||| |||| ||| | | ||| | |||| | Sbjct 1681 ATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTG 1740 Query 9849 CGATCAACGTAAAACGGGTTTACCGAGTCATGCGTGATCACAACCTGCTGCTTGAGCGGC 9908 ||||||| | ||||| |||||||| ||||||| | | ||| |||||||||| Sbjct 1741 CGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAA 1800 Query 9909 G-CATCAAGCAGC-CCGGCGTACCGCGCCGGCATGAAGGCCGTATCGCCGTTAACACCAG 9966 | | | | | || || | || || ||| |||| | | ||||| || || Sbjct 1801 AACCTGCTGTACCGCCATCGAAACGGGCA--CATACAGGCAGAGTGGCCGTGAAAGAAAG 1858 Query 9967 CGACACGCGCTGGTGCTCGGATGGCTTCGAATTCCGCTGCGACGACGGTGCGAAACTGAG 10026 | | ||| |||||||| || || ||||| ||| |||| || |||| | || |||| | Sbjct 1859 CAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCG 1918 Query 10027 CGTGACCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCTGGGTGGCCAGCCCGAC 10086 || || || || ||||||||||||||||| || || | ||||| || || | Sbjct 1919 TGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGG 1978 Query 10087 CGGCTACAGCGGCGATGACA-TACGCGACTTGATGCTGGAAAGCGTGGAGAAGCGTTTTG 10145 ||||| || | | || ||| ||| ||| | ||||||| | ||||| || || | Sbjct 1979 CGGCTTCAACAGTGA-AACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCG 2037 Query 10146 GCGACCTACTGCCGACCACACCGGTGCAATGGCTAAGCGATAACGGTTCGGCCTACATCG 10205 || || || ||| | | || ||| | ||||| | ||||| ||||| |||| | Sbjct 2038 GCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGG 2097 Query 10206 CTGAACAGACGCGCCTGTTTGCTCGACAGATTGGCCTACAGCCAGTGACCACGCCGGTAC 10265 || | | || |||| ||| || || | | || || | || || |||| |||| | Sbjct 2098 CTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGC 2157 Query 10266 GCAGCCCGCAGAGCAACGGCATGGCAGAGAGCTTCGTTAAGACAATCAAGCGCGACTACG 10325 | || ||| |||| ||||| || |||||||||||||| || || || ||||| |||||| Sbjct 2158 GGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACA 2217 Query 10326 TGGCGCACATGCCCAAGCCGGATCG---AGAGACAGCCTTGCGCAACCTGACGATTGCCT 10382 | ||||||||| || || | | | |||| | ||||| | || | Sbjct 2218 TCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAG---AACCTTGCAGAGGCGT 2274 Query 10383 TCGAGCATTACAACGAGCAGCATCCGCACAGCGCCTTGAAATACCGCTCGCCGAGGGAAT 10442 |||||||||| ||||| ||||||||| || || || || |||||||| |||||| Sbjct 2275 TCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAAT 2334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138364427020386