Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08] 172 sequences; 9,356,930 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq27 242 4e-59 >seq27 Length=543458 Score = 242 bits (268), Expect = 4e-59 Identities = 569/853 (67%), Gaps = 7/853 (1%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||| |||||| ||||| |||||||| |||||||| ||| || || || Sbjct 215767 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 215826 Query 13973 TCCATAAAATCAAATGGATTTGTTGAC-ATAAACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| || ||||||||| |||||||| | |||| || | || || ||| || Sbjct 215827 TCCATGAAGTCAAATGGA-TTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAG 215885 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 || ||| || |||| |||||||| ||| || |||| || || ||||| || | || Sbjct 215886 TAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAA 215945 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 ||||||| | || || | |||||| || |||||||| | ||||| Sbjct 215946 GGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAAT 216005 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 14211 | || ||||| | | | || |||| ||| ||| | || || ||||| Sbjct 216006 CTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAAA 216065 Query 14212 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 14271 ||| || | ||||| ||||| | |||||| || || || || || || |||||||| Sbjct 216066 GTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCAT 216125 Query 14272 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 14331 | |||| || || ||||| || || | ||| || ||||| |||||||| || ||||| Sbjct 216126 GAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCTC 216185 Query 14332 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14391 ||| ||||| || || | || ||||| | ||| |||| | | | || |||||| | Sbjct 216186 AACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATCT 216245 Query 14392 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATG 14451 | ||||| |||| |||| ||| ||| | || || || || ||||| || | Sbjct 216246 CATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGGAA 216305 Query 14452 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 14511 ||| |||||| | | | ||||| |||||||| || ||| || | || ||||| Sbjct 216306 TTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCTCGGAGTG 216365 Query 14512 TATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14571 ||||| ||||| ||||| ||||| ||||| ||| | ||||| | ||| ||||| Sbjct 216366 AATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAACCTC 216425 Query 14572 TG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATG 14630 | | | |||| |||| |||| |||||||| || ||||| ||| || ||||| || | Sbjct 216426 AGCACTGAAAT-TTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGAAGG 216484 Query 14631 CCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGA---GTTTTTTCCAATCGGCTA 14687 | | | | || ||| ||| || | || | | | | || ||||| || | Sbjct 216485 CAAGGACTCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCATGCA 216544 Query 14688 AATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACA 14747 |||||||| || |||| ||| ||| | |||||||| ||| | || | || |||| Sbjct 216545 AATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTGTACA 216604 Query 14748 TTACCCATATTTC 14760 || ||| || || Sbjct 216605 TTTGCCAGATATC 216617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344562956960