Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08]
172 sequences; 9,356,930 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq27 154 2e-32
>seq27
Length=543458
Score = 154 bits (170), Expect = 2e-32
Identities = 590/919 (64%), Gaps = 25/919 (3%)
Strand=Plus/Plus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
||||| |||||| |||||| |||||||| || || || || || |||| || ||
Sbjct 215767 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 215826
Query 21245 TCCATAAAATCAAATGGATT-TTCAGATT-TAAATATTTTATTACAACCCAGTTCTGATA 21302
||||| || ||||||||||| || | || || | |||| | ||||| || |
Sbjct 215827 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTG--CCCAGAGCTACCA 215884
Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362
|| ||| || || || || || | ||| || ||||| || || ||||| || | |
Sbjct 215885 GTAGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTA 215944
Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422
| ||||||||||| | ||| || | |||||| || ||| || || || |
Sbjct 215945 AGGAGACAGGAAGAGCGTCTGTGAAGTACCTTTTTTCGATCTCGACAGCCTCTGTGATAA 216004
Query 21423 TATTTATTATCCTAGATGTACTAGGGGGATACAAT----AATTGTTTAAACATCAAACAT 21478
| ||| || ||| | || || | | | || || ||| | ||| ||
Sbjct 216005 TCTTT----TCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAA 216060
Query 21479 GCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCG 21538
||||| ||| || || || || || || | || | ||||| || || || |||||
Sbjct 216061 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 216120
Query 21539 GGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATG 21598
||||| | |||||||| || ||||| || || || ||||| | |||||||||||| ||
Sbjct 216121 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 216180
Query 21599 CCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATC 21658
|||||||| ||||| || ||||| || |||||| || | | || | ||| | |||
Sbjct 216181 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATC 216240
Query 21659 CATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAA 21718
||| | ||||| | ||||||||||| ||||| ||| || || || || || ||
Sbjct 216241 CATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAAC 216300
Query 21719 AGATGAttt--ttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTT 21776
|| || || || | | ||| | ||| || | |
Sbjct 216301 AG--GAATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAGTCT 216358
Query 21777 CAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATT 21836
| || || || || || ||| ||||| || |||||||| ||| |||| || | | ||
Sbjct 216359 CGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTT 216418
Query 21837 GAACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCA 21895
||||||| | | | |||| || ||||||||||||| || || || ||| ||| |||
Sbjct 216419 GAACCTCAGCACTGAAAT-TTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCA 216477
Query 21896 AAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCCA 21951
|| || || | | | || || || ||| ||||| ||| || || |||||
Sbjct 216478 AAGAAGGCAAGGACTCTCGAGATGAAGAATTTTTCATTATC-GTTCATACGATTATTCCA 216536
Query 21952 ATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTT 22011
|| ||||| || | |||| ||| |||| ||||||||| ||| ||||
Sbjct 216537 GTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTG 216596
Query 22012 TTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGA 22071
|| ||||| ||||||||| | || | | || || | ||||| | | |||
Sbjct 216597 CTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAAGAGCACAAAAC-GACGTTTAT 216655
Query 22072 T-TCAACTAAAAGTGGTTC 22089
| |||||||| ||||||||
Sbjct 216656 TCTCAACTAAGAGTGGTTC 216674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531899656413280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |