Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08]
172 sequences; 9,356,930 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq31 172 7e-38
seq27 134 2e-26
>seq31
Length=271146
Score = 172 bits (190), Expect = 7e-38
Identities = 939/1474 (64%), Gaps = 53/1474 (4%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||||| ||||| || || || ||||| |||| ||||| ||||||| || ||
Sbjct 88213 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 88272
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| |||||||| ||||| | || | ||| | | ||| ||| |
Sbjct 88273 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 88332
Query 116023 TTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080
||||| | ||||| || | | | || | || | ||||||| ||| | || |
Sbjct 88333 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 88390
Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140
|| || || || ||||| || || | || || || || | || || | | || |
Sbjct 88391 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 88450
Query 116141 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTG 116200
||||| | || || | ||||| || || || || |||||||| || ||| |
Sbjct 88451 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 88510
Query 116201 CCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTT 116260
||||| || |||||||| | | | || ||||| |||| || | |||||
Sbjct 88511 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 88570
Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGA 116319
| ||||| | | || || | || | |||||| || | | ||| ||| | ||||
Sbjct 88571 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 88629
Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379
|||||||| || ||||||| || || | || || || || || |||||||||||
Sbjct 88630 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 88689
Query 116380 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 116433
|||||||| | | | | || |||| || || | ||| | ||||| ||
Sbjct 88690 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 88749
Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493
|| || |||| ||||| |||| ||||| ||| || ||| || | |||||| |
Sbjct 88750 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTC---A 88806
Query 116494 CA-CAAA--TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| |||| || || |||||| ||||||||||| || || | ||| |||||||
Sbjct 88807 CAGCAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAA 88866
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|||||||| || ||||| |||| || || || || ||||| | || || || || | |
Sbjct 88867 GCATCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTAC 88926
Query 116611 CATACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACTTTGT 116666
|| | | |||| | || ||| || || || |||| ||||| ||
Sbjct 88927 CAAAGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTC 88982
Query 116667 GTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGAC 116725
||| | ||||||| || || || | || | || | || || || || | | ||||
Sbjct 88983 GTACAATTCCTCAAATTCATCTCC-ATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAG 89041
Query 116726 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 116785
|||| || | ||| | ||| || || || | |||||||| || || |||||||| |
Sbjct 89042 AGAACAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACA 89101
Query 116786 GCGCCGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844
|| | ||| | || | | | || || || | | || || || ||| | ||
Sbjct 89102 AAGCGGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCA 89160
Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGA 116904
| ||| | | ||| || || ||||| || |||| ||||| || | || || ||
Sbjct 89161 ATGAAGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACCAG---GA 89217
Query 116905 CG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958
|| |||| | |||| ||||| | || || ||| || || | | |||||||
Sbjct 89218 CGTTTGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGA 89277
Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGACATC 117017
|| ||||||| || || || || || ||| || | ||| ||| | | ||
Sbjct 89278 ATAATACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTGT-GGCACGAATATT 89336
Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077
|| ||||||| |||||| || || || || |||||| || || ||| | | | |
Sbjct 89337 ATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGT 89396
Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137
|||| || || || || |||||| || | || | | ||| || ||||||||
Sbjct 89397 ATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTG 89456
Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 117197
||| || ||||||||||| || || || || | || || |||| |||| || ||
Sbjct 89457 TGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATAC-TTCTGA 89514
Query 117198 CATCTTATCGT---AGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254
| || || || | || || | || | |||||| || || ||||| ||||| |
Sbjct 89515 C-TCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGC 89573
Query 117255 GACCCGCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGG 117312
|| ||||||| || || ||| || ||| || || |||||| | ||| | |||
Sbjct 89574 AACACGCATAATCAAGTGTTGAGGACGTTCTGCAACAT--TACCATTAATTCTCAGAAGG 89631
Query 117313 TAAC-TCTTCTCCAAGGTCTTGAGACCAAAATAG 117345
||| |||| ||||||||||||| ||||| |||
Sbjct 89632 TAAGATCTT-TCCAAGGTCTTGAATCCAAAGTAG 89664
>seq27
Length=543458
Score = 134 bits (148), Expect = 2e-26
Identities = 388/587 (66%), Gaps = 25/587 (4%)
Strand=Plus/Plus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| | |||||||| | | | || || ||||| |||||| || |||
Sbjct 216060 AGCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACC 216119
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
|||||||||||| | ||||||||||||||| || | | ||| || || || ||||||||
Sbjct 216120 TGGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGAT 216179
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATC-- 127695
||||| ||| ||||| |||| | ||| || || || | | | || |||
Sbjct 216180 ACCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGC----GAACAATGCATCGTCATCAG 216235
Query 127696 -AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-T 127753
|| ||| |||| ||||| | ||||||| | ||||||||| | ||||| ||| || |
Sbjct 216236 AAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCAT 216295
Query 127754 TCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAAT 127811
| | | || ||| | ||| ||||||||||||||| |||| || || || |
Sbjct 216296 TGAACAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGT 216352
Query 127812 ATGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 127870
| || ||| ||| | | | ||| || | ||| | |||| || | ||||||
Sbjct 216353 AAGTCTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCG 216411
Query 127871 CTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 127930
| || |||||| | ||||| | | || ||| ||||| || || ||
Sbjct 216412 GGAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAG 216471
Query 127931 CCAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GG 127984
||||||| || || |||| | | | | |||||| |||||| ||||||| |
Sbjct 216472 GCAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGA 216528
Query 127985 GTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATT 128044
| |||||||| | | |||||| || |||| ||||| ||||||||| | |
Sbjct 216529 TTATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCT 216588
Query 128045 TGAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 128091
| |||| ||| || | || ||||| | | | ||||||| |||||
Sbjct 216589 TCGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 216635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505880959520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |