Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08]
172 sequences; 9,356,930 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq31 248 2e-60
seq4 89.7 1e-12
>seq31
Length=271146
Score = 248 bits (274), Expect = 2e-60
Identities = 539/801 (67%), Gaps = 7/801 (1%)
Strand=Plus/Minus
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||||||||||||| || || | |||||||| || || |||||||| |||| ||| |
Sbjct 89603 GAACGTCCTCAACACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCA 89544
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
||||||||| |||| | | | ||| | ||| | | |||||| |||||||
Sbjct 89543 AGAGTTATTGAAACTTATAACTTTATGAGTCAGAAGTATTTCACTCATGCCTCTCCTACT 89484
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542
|| |||||||| || || | |||| || | || || |||||| | | ||
Sbjct 89483 CTGTTTAACGCTGGTACCCCTCACCCACAAATGTCATCATG-TTTCTTAGTTGCCATGCG 89425
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
||||| || |||||||| ||||| ||| || | || ||| |||| | || || ||||
Sbjct 89424 GGATGACTCAATTGAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAAC 89365
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| ||||||||| | ||| ||||| ||||||| | | |||| | | || ||
Sbjct 89364 TGCTGGTGGAATTGGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGG 89305
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||| | ||| || |||||||| | || ||||||||| |||||||
Sbjct 89304 TACTAACGGTACTTCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCG 89245
Query 110723 ATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||||| | ||||||||||| | | ||| |||||||| | || | || || ||
Sbjct 89244 TTATGTTGACCAAGGTGGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATG 89185
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839
|||| | || || |||| ||| | || ||||||| || || || || || ||
Sbjct 89184 GCATGCCGACATCTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGAGATCAG 89125
Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899
||| | || ||||| || ||||||| | ||| | ||||||||| | || || |
Sbjct 89124 AGCTAGAGACTTATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACA 89065
Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGG 110959
|||||| ||| | || | | ||| | ||||||| || | || || |||||
Sbjct 89064 GAATGGCGATTGGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGG 89005
Query 110960 AAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCAAACAAA 111018
| | || ||||| || | ||||||| ||| ||||| ||||| | | ||||| |
Sbjct 89004 AGATGAATTTGAGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAAC-CA 88946
Query 111019 TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTT 111078
| ||| ||| | ||||||| | |||||||| ||||| |||||||| ||||| |
Sbjct 88945 TCAAAGCCCAAAAGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCAT 88886
Query 111079 ATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTA 111138
|| ||||||| ||| | ||| ||| |||| || | ||| || || ||||
Sbjct 88885 TCATGCTGTATAAGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTA 88826
Query 111139 AGTCTAGTAATTTGTGCTGTG 111159
| || ||| | |||||||
Sbjct 88825 AATCCTCTAACCTTTGCTGTG 88805
>seq4
Length=489146
Score = 89.7 bits (98), Expect = 1e-12
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365
||||| ||| || ||||| || || || || | ||||| ||| | |||||||||
Sbjct 376065 AGACACCTGATGGATGATGATCCTGTCCTTTTTAACCGTCAACCGTCATTACATAAAATG 376006
Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGT 305425
|| |||||||| |||| |||||||||| | | | || ||| || ||||| || |
Sbjct 376005 TCCATGATGGCACATAGAGTCAAAGTAATGCCCTACTCTACTTTTAGACTAAATTTATCT 375946
Query 305426 GCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
| | | || || ||||| ||||| || || |||||||||||| | || || || |||
Sbjct 375945 GTTACATCACCGTACAATGCTGATTTCGACGGTGATGAAATGAATTTACACGTTCCACAA 375886
Query 305486 TC 305487
||
Sbjct 375885 TC 375884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186810184561292
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |