Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08]
172 sequences; 9,356,930 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq31 190 3e-43
seq27 129 7e-25
>seq31
Length=271146
Score = 190 bits (210), Expect = 3e-43
Identities = 935/1469 (64%), Gaps = 43/1469 (3%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| |||| ||||| || || || ||||| |||| ||||| ||||||| || ||
Sbjct 88213 TAGATGTTGGAAGTGTAAGGTTCGAAACACTCGTTGTAACCCAGAATTTGGGAAGTTGAA 88272
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| |||||||| ||||| | || | ||| | | ||| | ||| |
Sbjct 88273 GCAGTGGGCATAGGTGCAACTAGCAACGAGTTTCTTAAACCTGTGGAAACAATCTTGGCT 88332
Query 118302 TTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 118359
||||| | ||||| || | | | || | || | | ||||| ||| | || |
Sbjct 88333 TTGAGTGATTCCCATTCCCACAGCTCAGAG--GGCTTCTTGTCCCACAAGTCATATTGCA 88390
Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419
|| || || || ||||| || || | || || || || | || || | | || |
Sbjct 88391 AAATGCCCTGAGATGCTGGAGAACCTTGGAAGGTTTCGTAGGCTCCTTCTTCGACGGCTA 88450
Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479
||||| | || || | ||||| || || || ||||||||||| || ||| |
Sbjct 88451 ATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGATAGTTTCAAAAATCTGAATATTAAGCT 88510
Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539
||||| || |||||||| | | || || ||||| |||| || | |||||
Sbjct 88511 GTTTGGCTTCTGGAGAATCAAAAGGAATTCTCAACTTCATAAAAGCATCAGCTAAACCTT 88570
Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGGA 118598
| ||||| | | || || | || | |||||| || ||| ||| ||| | ||||
Sbjct 88571 GAACACCCACAGCTATAGGTCTATTACGCATATTCGATCTCCTAGCT-TCTGGAACGGGG 88629
Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658
|||||||| || ||||||| || || | || || || || || |||||||||||
Sbjct 88630 TAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAACCACTTTGGTGATTTCATGC 88689
Query 118659 AGCTTTTCGTAATCAAAACTGC---GAGTCTCTTCATTG---ACATACTTAGGAAGGGCG 118712
|||||||| | | | | || |||| || || | ||| | ||||| ||
Sbjct 88690 AGCTTTTCAAAGTTGTACCAGCAGTGAGTATCATCGGTTTCAACAAAGGCTGGAAGAGCA 88749
Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772
|| || |||| ||||| |||| ||||| ||| || ||| || | |||||| |
Sbjct 88750 ATAGAAGCCAAGTTACAGACAGCAGTCTCTTCCGGGGAAGAGTATTCAACAATTTCACAG 88809
Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832
|| | ||| || |||||| ||||||||||| || || | ||| ||||||| |||
Sbjct 88810 CAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTAGTTTTTTTGTTACAAGCA 88869
Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892
||||| || |||||| |||| || || || || ||||| | || || || || | |||
Sbjct 88870 TCCTTATACAGCATGAATGGAGTACCAGTTTCTGTTTGTGCCTCAAGGATGGCGTACCAA 88929
Query 118893 ACATCGGCAGCTGGCACAGTGGCGTTGGCT----CGCCCCTCTTCCTCGTACTTTGTGTA 118948
| | ||| | || ||| || || || || | ||||| || |||
Sbjct 88930 AGCTTTTGGGCTTTGATGGT----TTGTCTTCCACGACCTTCCTTTTCGTATCTTTCGTA 88985
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008
| | ||||| || || || | | || | || || || || | | ||| ||||
Sbjct 88986 CAATTCCTCAAATTCATCTCCATAGACGTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAA 89045
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
|| | ||| | ||| || || || | |||||||| || || |||||||| | ||
Sbjct 89046 CAGGGTCCAATCGCCATTCTGTTCTACTCTTTTCATGAACAGATCAGGGATCCACAAAGC 89105
Query 119069 CGAGAAGAGATCCCGACAGC-GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127
| ||| | || | | | || || || | | || || || ||| | || | |
Sbjct 89106 GGGGAATAAGTCTCTAGCTCTGATCTCCT-CTTTACCATGGTTCTTACGAATATCAATGA 89164
Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-- 119185
|| | | ||| || || ||||| || |||| ||||| || | || || | ||||
Sbjct 89165 AGGCAAAGATGTCGGCATGCCATGGCTCCAAGTACAAAGCAAATGCACC---AGGACGTT 89221
Query 119186 ----ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241
|||| | |||| ||||| | |||||| ||| || || | | ||||||||| |
Sbjct 89222 TGTTACCACCTTGGTCAACATAACGAGCAGTGTTGTTGAAGACCCTCACCATTGGAATAA 89281
Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTG 119299
|||||| || || || || || ||| | || || |||| | | || ||
Sbjct 89282 TACCATTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG--TGGCACGAATATTATG 89339
Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359
||||||| |||||| || || || || |||||| || || ||| | | | | |
Sbjct 89340 AATGTGCAAACCAATTCCACCAGCAGTTTTGGAGATTAAAGCACATTCCTTCAAAGTATC 89399
Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419
||| || || || || |||||| || | || | | ||| || |||||||| ||
Sbjct 89400 GTAAATGCCTTCAATTGAGTCATCCCGCATGGCAACTAAGAAACATGATGACATTTGTGG 89459
Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACA 119478
|| ||||||||||| || ||||| || | || || |||| |||| | || ||
Sbjct 89460 GTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCATGAGTGAA-ATACTTCTGACTCA 89518
Query 119479 TCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCC 119538
| || || || || | || | |||||| || || ||||| ||||| | || |
Sbjct 89519 TAAAGTTATAAGTTTCAATAACTCTTGCAATGTCATCACCATGAATGCCGATAGCAACAC 89578
Query 119539 GCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGGTAAC- 119595
|||||| || || ||| || ||| || || |||||| | ||| | ||||||
Sbjct 89579 GCATAATCAAGTGTTGAGGACGTTCTGCAACAT--TACCATTAATTCTCAGAAGGTAAGA 89636
Query 119596 TCTTCTCCAAGGTCTTGAGACCAAAATAG 119624
|||| ||||||||||||| ||||| |||
Sbjct 89637 TCTT-TCCAAGGTCTTGAATCCAAAGTAG 89664
>seq27
Length=543458
Score = 129 bits (142), Expect = 7e-25
Identities = 386/586 (66%), Gaps = 25/586 (4%)
Strand=Plus/Plus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| | |||||||| | | | || || ||||| |||||| || ||||
Sbjct 216061 GCAAAGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 216120
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||||||||| | ||||||||||||||| || | | ||| || || || ||||||||
Sbjct 216121 GGCATGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATA 216180
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATC--- 130191
||||| ||| ||||| |||| | ||| ||||| || | | | || |||
Sbjct 216181 CCCTCAACAGCAGCGAAGGCAACCAAACGTTCAGC----GAACAATGCATCGTCATCAGA 216236
Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250
|| ||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || ||
Sbjct 216237 AATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATT 216296
Query 130251 CA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 130308
| | || ||| | ||| ||||||||||||||| |||| || || || ||
Sbjct 216297 GAACAGGAATTCAGAC---TCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTA 216353
Query 130309 TGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 130367
|| ||| || | | | ||| || | ||| | |||| || | ||||||
Sbjct 216354 AGTCTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAACCGTAAAAGCATTTTGCTTCGG 216412
Query 130368 TTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 130427
| || |||||| | ||||| | | || ||| ||||| || || ||
Sbjct 216413 GAAGTTGAACCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGG 216472
Query 130428 CAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 130481
||||||| || || |||| | | | | |||||| |||||| ||||||| |
Sbjct 216473 CAGCAAAGAAGGCAAGGACTCTCGAGATGAAGAATTT---TTCATTATCGTTCATACGAT 216529
Query 130482 TCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTT 130541
| |||||||| | | |||||| || |||| ||||| ||||||||| | ||
Sbjct 216530 TATTCCAGTCATGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTT 216589
Query 130542 GAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 130587
|||| ||| || | || ||||| | | | ||||||| |||||
Sbjct 216590 CGGCCTGCTTGTACATTTGCCAGATATCGTGGTACTTCAAAGGGAA 216635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433870364320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |