Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08]
172 sequences; 9,356,930 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq31 208 9e-49
seq27 104 3e-17
>seq31
Length=271146
Score = 208 bits (230), Expect = 9e-49
Identities = 789/1225 (64%), Gaps = 21/1225 (2%)
Strand=Plus/Minus
Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288
|| || | ||||| || || ||||| |||||||| || ||||||| || | || |
Sbjct 89590 ACTTGATTATGCGTGTTGCTATCGGCATTCATGGTGATGACATTGCAAGAGTTATTGAAA 89531
Query 104289 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 104347
| || || ||| || | |||| |||| ||| || | || || || || || |||
Sbjct 89530 CTTATAACTTTATGAGTCAGAAGTAT-TTCACTCATGCCTCTCCTACTCTGTTTAACGCT 89472
Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407
||||| || || |||||||| || ||| | | |||| ||| ||||||||
Sbjct 89471 GGTACCCCTCACCCACAAATGTCATCATGTTTCTTAGTTGCCATGCGGGATGACTCAATT 89412
Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467
| || || || | ||| | | ||| ||||| |||||| || ||||| || |||
Sbjct 89411 GAAGGCATTTACGATACTTTGAAGGAATGTGCTTTAATCTCCAAAACTGCTGGTGGAATT 89352
Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527
|| ||||||| ||| || | | |||| ||| ||| || || || |||
Sbjct 89351 GGTTTGCACATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACT 89292
Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587
|| ||||||||||||||||| | | || || ||| ||| || || ||||| | |||
Sbjct 89291 TCGAATGGTATTATTCCAATGGTGAGGGTCTTCAACAACACTGCTCGTTATGTTGACCAA 89232
Query 104588 GCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATAT 104643
| | || | || | || | | || | || | ||||||||||| || || ||
Sbjct 89231 GGT-GGTAACAAACGTCCTGGTGCATTTGCTTTGTACTTGGAGCCATGGCATGCCGACAT 89173
Query 104644 CATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATC 104702
| | | ||| |||| | ||| ||||| ||| | ||||| | | | || | ||
Sbjct 89172 CTTTGCCTTCATTGATATTCGTAAGAACCATGGTAAAGAGGA-GATCAGAGCTAGAGACT 89114
Query 104703 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATT 104762
| ||| ||||| | ||||| || ||||| |||||||| ||||| || ||| |||| |||
Sbjct 89113 TATTCCCCGCTTTGTGGATCCCTGATCTGTTCATGAAAAGAGTAGAACAGAATGGCGATT 89054
Query 104763 GGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTG 104822
|| | || || | |||| | || ||||| || |||| | | || || || ||||
Sbjct 89053 GGACCCTGTTCTCTCCAAGTGAAGCTCCTGGCCTTGCCGACGTCTATGGAGATGAATTTG 88994
Query 104823 AAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCG 104882
| | | ||| || ||||| | |||||||| | | || | |||
Sbjct 88993 AGGAATTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAACCATCAAAGCCCAAA 88934
Query 104883 ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACA 104942
| | ||| | || || || || | ||||| || |||||||| |||| |||||| || |
Sbjct 88933 AGCTTTGGTACGCCATCCTTGAGGCACAAACAGAAACTGGTACTCCATTCATGCTGTATA 88874
Query 104943 AAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATC 105002
| || || |||||| |||| | ||| || ||||| |||||||| || || || || |
Sbjct 88873 AGGATGCTTGTAACAAAAAAACTAACCAGAAGAACTTGGGTGTCATTAAATCCTCTAACC 88814
Query 105003 TCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCAT 105062
| || ||||| | |||| | | || ||||| ||||| |||||| | || |
Sbjct 88813 TTTGCTGTGAAATTGTTGAATACTCTTCCCCGGAAGAGACTGCTGTCTGTAACTTGGCTT 88754
Query 105063 CAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATGAAA 105116
| || ||||| || | ||| || | || || | || || | | |||||
Sbjct 88753 CTATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACTCACTGCTGGTACAACTTTGAAA 88694
Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176
| || || ||| | || ||| || || ||| | |||||| |||| || |||||||
Sbjct 88693 AGCTGCATGAAATCACCAAAGTGGTTACTCGTAACTTGAACAGAATTATCGACAGAAATT 88634
Query 105177 TTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235
||||||||||| ||| ||| | | ||| |||||| | | | || || | | | |||
Sbjct 88633 TTTACCCCGTTCCAGA-AGCTAGGAGATCGAATATGCGTAATAGACCTATAGCTGTGGGT 88575
Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCG 105295
||||| ||| | || |||| || || | | | |||||||| |||||
Sbjct 88574 GTTCAAGGTTTAGCTGATGCTTTTATGAAGTTGAGAATTCCTTTTGATTCTCCAGAAGCC 88515
Query 105296 AAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCA 105355
|| | | ||| | || ||||| || || || || || ||| | || || | ||
Sbjct 88514 AAACAGCTTAATATTCAGATTTTTGAAACTATCTACCATGCAGCTTTGGAAGC--CTCCA 88457
Query 105356 --GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAG 105413
|| || || | | || || | || |||||||| | ||||||||||| || || |
Sbjct 88456 ACGAATTAGCCGTCGAAGAAGGAGCCTACGAAACCTTCCAAGGTTCTCCAGCATCTCAGG 88397
Query 105414 GGGTGCTTCAATTTGATATGTGGGA 105438
| | | |||| ||| |||||||
Sbjct 88396 GCATTTTGCAATATGACTTGTGGGA 88372
>seq27
Length=543458
Score = 104 bits (114), Expect = 3e-17
Identities = 167/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782
|||||| | || |||| ||||| || | || || || ||||| |||| ||| || |
Sbjct 216293 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTTCT 216234
Query 94783 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 94841
| | | || || || ||||| || | | || || || |||||||||||||||
Sbjct 216233 GATGACGATGCATTG-TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAGGGTATCTT 216175
Query 94842 CTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900
||| || || || || ||| |||| | ||| | |||||| |||||||||||||||||
Sbjct 216174 CTTTTCAGGATCTTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTCTCATGCCAGGTT 216116
Query 94901 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
| ||||||||| |||||||| | | ||||||||| | ||| || |||||
Sbjct 216115 TGACCTTCTCCAATGAGCTTATTTGCAGAGACGAGGGATTACACACTGACTTTGC 216061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259545989280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |