Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08] 172 sequences; 9,356,930 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq12 152 1e-31 seq22 143 6e-29 seq21 143 6e-29 seq118 102 2e-16 seq123 95.1 3e-14 seq130 93.3 1e-13 seq64 93.3 1e-13 seq4 87.8 4e-12 >seq12 Length=252128 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 |||||| || ||||| | ||| || || || |||| ||||| || | || |||||| || Sbjct 86106 TCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCTACC 86047 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| || ||||| ||||| || || | ||||||||||| || ||||| |||||||| Sbjct 86046 GTCTTCCAGTTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTT 85987 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| ||| ||||||||||| |||| || || || || || || Sbjct 85986 GTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAAT 85927 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || || || || || | ||| | |||||||| Sbjct 85926 AGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 85888 >seq22 Length=213742 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| | || | ||| ||||||||||| ||||| | ||||||||| | | |||||| Sbjct 331 AAGTCTTAATACCAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCT 272 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 || ||||| || ||||| ||||||||||| | ||||| ||||| || ||||||||||| Sbjct 271 ACCGTCTTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATACCTTC 212 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 ||||||||| ||||| || || || || || ||||| | || || || | || Sbjct 211 CTTGTCTTGAATCTTAGATTTGACGTTATCAATAGTATCTGATGACTCTACCTCAAGAGT 152 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| ||||| || || | ||| || | ||| | ||||| Sbjct 151 GATAGTCTTACCAGTTAGAGTCTTGACGAAAATCTGCAT 113 >seq21 Length=97381 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | |||||| |||||||| ||||||| |||||||| | | |||||| || Sbjct 97291 TCTTAGAACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTTCTACC 97232 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| || ||||| ||||| || || | ||||| ||||| || |||||||||||||| Sbjct 97231 GTCTTCCAGTTGCTTACCAGCAAAAATTAAACGTTGCTGGTCAGGAGGAATACCTTCCTT 97172 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| ||||| || ||| || || |||||||| | ||||| || | ||||| Sbjct 97171 ATCTTGAATCTTGGATTTGACATTATCAATAGTGTCTGATGACTCCACCTCAAGAGTGAT 97112 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || || | ||||| | || | |||||||| Sbjct 97111 AGTCTTACCTGTTAGGGTTTTAACAAAAATCTGCATTTT 97073 >seq118 Length=210 Score = 102 bits (112), Expect = 2e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784 || || ||| ||||||| ||||| ||||| ||| ||||||||||||| |||||||||| Sbjct 49 ATGTCAAGGCCTGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCT 108 Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844 | | | |||||| || ||||||||||| |||||||| |||| | | |||| ||| Sbjct 109 TGTGCGGGTCCCCGTCAATTCCTTTGAGTTTT-ACCTTGCGACCGTACTCCCCAGGCGGA 167 Query 7845 -ATATTTACGCGTTAGCT 7861 | || ||||||||||| Sbjct 168 GAACTTAACGCGTTAGCT 185 >seq123 Length=186 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784 || || || || |||||| ||||| ||||| ||| |||||||| |||| |||||||||| Sbjct 48 ATGTCAAGAGTAGGTAAGGTTCTTCGCGTTGCATCGAATTAAACAACATGCTCCACCGCT 107 Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844 | | | | |||||| || ||||||||||| |||||||| |||| | | |||| || Sbjct 108 TGTGCGGGCCCCCGTCAATTCATTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGGT 167 Query 7845 ATATTT--ACGCGTTAGCT 7861 | || |||||||||| Sbjct 168 CTCCTTCATCGCGTTAGCT 186 >seq130 Length=170 Score = 93.3 bits (102), Expect = 1e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784 || || |||| ||||||| |||| ||||| || ||||||||||||| |||||||||| Sbjct 52 ATGTCAAGGGCTGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCT 111 Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843 | | | | |||||| || ||||||||||||| |||||| |||| | | |||| || Sbjct 112 TGTGCGGGCCCCCGTCAATTCCTTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGG 170 >seq64 Length=6036 Score = 93.3 bits (102), Expect = 1e-13 Identities = 192/283 (68%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTAT 7502 ||||| || ||||||| || | ||| ||||| ||| | ||| | ||| | || | Sbjct 216 TTATACTTTATATTTGCATTATTCTGTGG-ATTATTAGGATCAATAATGTCTTTAATATT 274 Query 7503 AAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAA 7562 ||| ||||||||| | ||||| ||| |||||||| | ||||| ||| | | ||| Sbjct 275 AAGATTAGAATTATCAGCTCCTGGTAACCAAATATTAATGGGTAACCATCAATTATTCAA 334 Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622 || | || || ||||| | | ||| | |||||||| || ||||| | | || Sbjct 335 TGTAGTAGCAACAGCACATGCTGTATTAATGGTATTCTTTTTAGTAATGCCAGCTGCAAT 394 Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCC 7682 ||| ||| || |||| | | ||||||||||| ||||| ||||||| | ||| | Sbjct 395 AGGATTTTTTGGTAATTATCTATTACCTTTAATGATAGGTGCAAGTGATATGTCATTTGC 454 Query 7683 AAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 || | || ||||| ||||||||| |||| ||| | ||| Sbjct 455 TAGATTAAATAATATTTCATTTTGATTATTACCACCTGCTTTA 497 >seq4 Length=489146 Score = 87.8 bits (96), Expect = 4e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| |||||||||||||||||||| || || || || || ||||||||||| |||||||| Sbjct 361239 GAAAATTTGACCATCAGTAATAGAAATGACGTTGGTTGGAATATAAGCAGAGACATCACC 361180 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATT 4580 |||| || || | || || || || || | || |||||||| || || Sbjct 361179 ACCTTGGGTCTCAATGACTGGCAAAGCGGTCAAAGAACCACCACCCAATTT 361129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528571959368