Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08] 172 sequences; 9,356,930 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq31 378 1e-99 seq27 147 3e-30 >seq31 Length=271146 Score = 378 bits (418), Expect = 1e-99 Identities = 1337/2080 (64%), Gaps = 53/2080 (3%) Strand=Plus/Plus Query 76772 CTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACC 76831 ||| || | |||||||||||| | || || || | || ||||| || ||||||||||| Sbjct 87825 CTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATACC 87884 Query 76832 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891 ||| |||| || |||| || || || ||||| || |||| ||| | | || Sbjct 87885 AGTCTTTAATCCTTTCTTCCAACCATAAAAGTGCATACTGGTCAATTTACCCATAGTTGG 87944 Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 76951 | | | ||||| |||| ||||||| ||||||||| | ||| |||||| || || Sbjct 87945 AGCCATCAGGTGAATGTTCAACGACTGAGATTGATCGATATAGGCTGATCTATCGGCAGC 88004 Query 76952 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 77011 ||| | ||||| |||||||||| ||| ||||||| ||| ||| ||| ||| | | Sbjct 88005 CATATCAATAATAGTCTTTTGAGAAATCTCCCAAACAGTCTTGTAAAGGCCTTTAAGTTG 88064 Query 77012 ATCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTAT 77068 || || | ||| | ||||||||| || || ||||| || || ||| || || Sbjct 88065 CTCAGGTATGTTGGGCAAATTTTGAATAGAGCCGTTGTCTGAAATGATATGATTTTTCAT 88124 Query 77069 ATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128 | ||| | ||| | | || || | | | | | | ||||||||| ||||| Sbjct 88125 GTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTTG 88184 Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 ||||||||||| ||||| | || | ||| || || || || ||||| | | | || Sbjct 88185 AAATTCTCCAGCTAATACACGGCGTGAGTAGATGTTGGAAGTGTAAGGTTCGAAACACTC 88244 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248 |||| |||| |||||| | ||| |||||||| ||||||||||| || | || || Sbjct 88245 GTTGTAACCCAGAATTTGGGAAGTTGAAGCAGTGGGCATAGGTGCAACTAGCAACGAGTT 88304 Query 77249 TCTGAGACCATGTGTTCTGATT-TTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307 ||| | ||| |||| | | || |||| || ||| ||| ||||| || || || | Sbjct 88305 TCTTAAACC-TGTGGAAACAATCTTGGCTTTGAGTGATTCCCATTCCCACAGCTCAGAGG 88363 Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATG 77367 | ||||| | || ||||| | ||| || | | || || || | | | Sbjct 88364 GCTTCTTGTCCCACAAGTCATATTGCAAAATGCCCTGAGATGCTGGAGAACCTTGGAAGG 88423 Query 77368 TTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAA 77427 |||| || | ||||||| | |||| ||| |||||||| ||| | | || | Sbjct 88424 TTTCGTAGGCTCCTTCTTCGACGGCTAATTCGTTGGAGGCTTCCAAAGCTGCATGGTAGA 88483 Query 77428 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTA 77487 | ||||| ||||||| |||| || | || ||||| | |||||| ||| | | | Sbjct 88484 TAGTTTCAAAAATCTGAATATTAAGCTGTTTGGCTTCTGGAGAATCAAAAGGA-ATTCTC 88542 Query 77488 AAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 77546 || ||||| ||||| ||||| || ||||| || | | | |||||||||| | | || Sbjct 88543 AACTTCATAAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATA 88602 Query 77547 TTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTT 77606 || || | |||||||||||| || ||| |||| |||| |||||| | || | || Sbjct 88603 TTCGATCTCCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTA 88662 Query 77607 CTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATAACA 77666 | | ||| ||||| | || | || || ||| | | | ||| | | | Sbjct 88663 CGAGTAACCACTTTGGTGATTTCATGCAGCTTTTCAAAGT----TGTACCAGCAGTGAGT 88718 Query 77667 AACATG---TTCAA-------------AGCTATAGATGCTAGATTACAAACTGCTACCTC 77710 | ||| ||||| ||| ||||| || | ||||| || || ||| Sbjct 88719 ATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTC 88778 Query 77711 ATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAG 77770 | | | | |||| | || || || || ||| |||| || |||| Sbjct 88779 TTCCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAA 88838 Query 77771 ATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGT 77830 || | ||||| | ||||| || || | |||||||| || || || ||||| || || Sbjct 88839 GTTCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGT 88898 Query 77831 TTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTA 77890 ||| | |||| || | || | | ||| | | ||||| || | ||||| Sbjct 88899 TTCTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTC 88954 Query 77891 T----CGCCTCTCTCTTTCATAT--TGAGTATATAGCCGTTCAAATTCATCTCCCCAAAC 77944 | || | || |||| ||| | ||| | || |||||||||||||| | || Sbjct 88955 TTCCACGACCTTCCTTTTCGTATCTTTCGTACAATTCC--TCAAATTCATCTCCATAGAC 89012 Query 77945 ATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAAC 78004 || | | ||||| |||| |||| | | || | ||| || |||| | | || Sbjct 89013 GTCGGCAAGGCCAGGAGCTTCACTTGGAGAGAACAGGGTCCAATCGCCATTCTGTTCTAC 89072 Query 78005 TCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTC 78064 || |||||| || |||||||| ||||| | ||| |||| |||| | ||| || Sbjct 89073 TCTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTC 89132 Query 78065 TTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 78124 || || || ||||| || ||| | || | | || || | ||||||||| || Sbjct 89133 CTCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTC 89192 Query 78125 TAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGT 78184 | || | || | | ||||| ||||| ||||| || || || | ||| | || || Sbjct 89193 CAAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGT 89252 Query 78185 GTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAAT 78244 ||| || | || |||| ||||||||||||||| || || || || || || |||| ||| Sbjct 89253 GTTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAAT 89312 Query 78245 ATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGA 78304 || ||| | || ||||||||| |||| | || ||||| || || | || || Sbjct 89313 GTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGA 89372 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTT 78364 |||| ||| || ||||| |||||||| || || || || ||||||| |||| Sbjct 89373 GATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGC 89432 Query 78365 AAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGA 78424 || | ||||| |||||||| | ||| || || || ||||| | || ||||| Sbjct 89433 AACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGA 89492 Query 78425 TGCATGCGTAAACCATTT----TTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTA 78480 ||||| || || | || ||| |||| || || ||||||||| || | | | Sbjct 89493 GGCATGAGTGAAATACTTCTGACTCATAAAG----TTATAAGTTTCAATAACTCTTGCAA 89548 Query 78481 TGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCG 78540 |||| |||||| || | || |||||||| | || || ||||| | ||| | Sbjct 89549 TGTCATCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAA 89608 Query 78541 TCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 78600 ||| ||| ||| ||| | ||| ||| ||||||| || || || ||||| ||||| | Sbjct 89609 CATTACCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAGTTAT 89668 Query 78601 ATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAA 78660 | ||||||||| ||||| | |||| |||| || || | ||| || ||| |||| Sbjct 89669 ACTGAAAGTCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGGACAA 89728 Query 78661 TATCCATGACAGTAGTT---GAAATAATAGGAGATCGTACACCATTTTTAGGATTAACAT 78717 | | || ||| | |||| | |||||| || || || || || || | | Sbjct 89729 TGT---TGTAAGTGTCTTCAGAAACCAGAGGAGAGTGTTTTCCGTTCTTTGGGTTGATGT 89785 Query 78718 AGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAG 78777 | | | | || |||| |||| | | || | || | || | ||||||| ||| | Sbjct 89786 ATTCATACAACTCTTTGGTTACCTGAGAGTATTGCTTAGTGGTCTGTTTGTGTAAATTGG 89845 Query 78778 ATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 | ||||| |||||||| || | ||| |||||||| || || Sbjct 89846 AAACAGCAATTCTTGCTGCCAAAATGGCATAATCGGGGTG 89885 >seq27 Length=543458 Score = 147 bits (162), Expect = 3e-30 Identities = 555/857 (65%), Gaps = 18/857 (2%) Strand=Plus/Plus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || ||| || | || ||||| || || ||||| || |||| || || || Sbjct 215767 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTTTTACCGGCCAAAGAAATGTTC 215826 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| || ||||||||||| | || || | ||||| || | || | Sbjct 215827 TCCATGAAGTCAAATGGATTGTTGACGTTGTACACCTTTTTGTTGCCCAGAGCTACCAGT 215886 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-TAAG 48028 ||||| || |||||||| || | ||| ||||| || ||||| || | |||| Sbjct 215887 AGTCTGTCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATCCCCAGTAAG 215946 Query 48029 TTTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTA 48087 | | || ||||| || || ||| | || || |||||| |||||| || || | Sbjct 215947 GAGA-CAGGAAGAGCGTCTGTGAAGTACCTTTT-TTCGATCTCGACAGCCTCTGTGATAA 216004 Query 48088 TCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAA 48147 || | || |||||||||| | | || ||||| ||| | || || |||| Sbjct 216005 TCTTTTCAACGATTTCCTCACTGGCTCTATTGTTTAAATGAGAAAATAGCAAGCAAGCAA 216064 Query 48148 AATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCA 48207 | ||| || | || || ||||| | ||| | || || || || || | ||| |||| Sbjct 216065 AGTCAGTGTGTAATCCCTCGTCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCA 216124 Query 48208 TTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTT 48267 | || || | || || | ||| || || | || |||||||| |||||||| || || | Sbjct 216125 TGAGACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAAGATCCTGAAAAGAAGATACCCT 216184 Query 48268 CTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACC 48324 | || || || || || | | || || | || |||| | ||||| | Sbjct 216185 CAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAATGCATCGTCATCAGAAATCCATC 216244 Query 48325 GTTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383 ||||| |||||||| |||||| | ||| || || || || || ||||| || || Sbjct 216245 TCATGGCCCAGTCAGCCTT-TTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAGG 216303 Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTA--AAAGACTATACATTTCGG 48441 || | || || |||||| | ||||||||| || | || || || | |||| Sbjct 216304 AATTCAGACTCTTTTGGATCTTTGATGTAAGTATCAATCAGCAAGGAGTAAG--TCTCGG 216361 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 ||||||| || || || ||||| || |||||||| ||| | ||||| | | || | Sbjct 216362 AGTGAATGTTCTCCATCATGATCTGGAAACCGTAAAAGCATTTTGCTTCGGGAAGTTGAA 216421 Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 |||| | || || ||| |||| || ||||| || || || ||| |||||||| | Sbjct 216422 CCTCAGCACTGAAATTTTCCACCAAGTTTTCATTGACAATACCGTCAGAGGCAGCAAAGA 216481 Query 48562 ATGCTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCA 48617 | || | || | | | || || ||||||| || ||| | |||||||||||| Sbjct 216482 AGGCAAGGAC-TCTCGAGATGAAGAATTTTTCATTATCGTTCATACGATTATTCCAGTCA 216540 Query 48618 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTA 48677 | | ||| || | |||| ||| ||||| |||||||| || || || || | || Sbjct 216541 TGCAAATCCTTACCCAGGTCTATTTCCTCAGCAGTCCAAAAGGAAGCTTCGGCCTGCTTG 216600 Query 48678 TACATATTCCATATATC 48694 ||||| | ||| ||||| Sbjct 216601 TACATTTGCCAGATATC 216617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667306462080