Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08]
223 sequences; 9,369,803 total letters
Query= NC_000902.1
Length=60942
Score E
Sequences producing significant alignments: (Bits) Value
seq86 235 2e-57
>seq86
Length=863
Score = 235 bits (260), Expect = 2e-57
Identities = 145/155 (94%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 4827 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 4886
|||| | ||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 155 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 96
Query 4887 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 4946
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 95 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 36
Query 4947 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCAC 4981
| ||||||||||||| |||||||| ||||||||||
Sbjct 35 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1
Score = 176 bits (194), Expect = 2e-39
Identities = 109/117 (93%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 4519 TGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 4578
||||| |||||||||||||||||| ||||| || || |||||||| ||||||||||||||
Sbjct 331 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 272
Query 4579 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 4635
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 271 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 215
Score = 167 bits (184), Expect = 9e-37
Identities = 107/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 58885 TGCTGCTCCCAGCTCAACTCTCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 58944
||||| | | |||||||| | ||| ||||| || || |||||||| ||||||||||||||
Sbjct 331 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 272
Query 58945 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 59001
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 271 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 215
Score = 104 bits (114), Expect = 9e-18
Identities = 89/110 (81%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 59508 TCACTTCACACCTCTCTGTTTGTTGATAAGTTCAATATCCTGCTGGCAACTGGCGCAAGC 59567
||||||| |||||||||||| |||||||||| | ||||| ||||||||| || ||||
Sbjct 110 TCACTTCGAACCTCTCTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGT 51
Query 59568 TCTGCATCCACGAACAGCCAGGCGTCGCCGCTCATCTATCGGATCGCCAC 59617
| || || |||| ||||||||| || |||||||||||||||||||
Sbjct 50 CCGACAACCCTGAACGACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194892283899504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |