Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= NC_000924.1 Length=61670 Score E Sequences producing significant alignments: (Bits) Value seq86 235 2e-57 >seq86 Length=863 Score = 235 bits (260), Expect = 2e-57 Identities = 145/155 (94%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 60152 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 60211 |||| | ||||||| |||||||||||||||| | ||||||||||||||||||||||||| Sbjct 155 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 96 Query 60212 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 60271 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 36 Query 60272 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCAC 60306 | ||||||||||||| |||||||| |||||||||| Sbjct 35 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1 Score = 235 bits (260), Expect = 2e-57 Identities = 145/155 (94%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 4828 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 4887 |||| | ||||||| |||||||||||||||| | ||||||||||||||||||||||||| Sbjct 155 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 96 Query 4888 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 4947 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 36 Query 4948 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCAC 4982 | ||||||||||||| |||||||| |||||||||| Sbjct 35 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1 Score = 176 bits (194), Expect = 2e-39 Identities = 109/117 (93%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 4520 TGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 4579 ||||| |||||||||||||||||| ||||| || || |||||||| |||||||||||||| Sbjct 331 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 272 Query 4580 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 4636 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 271 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 215 Score = 152 bits (168), Expect = 2e-32 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 59844 TGCTGCTCCCAGCTCCACTCTCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 59903 ||||| | | ||||| || | ||| ||||| || || |||||||| |||||||||||||| Sbjct 331 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 272 Query 59904 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 59960 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 271 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197221877730432