Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08]
223 sequences; 9,369,803 total letters
Query= NC_000924.1
Length=61670
Score E
Sequences producing significant alignments: (Bits) Value
seq86 235 2e-57
>seq86
Length=863
Score = 235 bits (260), Expect = 2e-57
Identities = 145/155 (94%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 60152 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 60211
|||| | ||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 155 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 96
Query 60212 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 60271
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 95 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 36
Query 60272 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCAC 60306
| ||||||||||||| |||||||| ||||||||||
Sbjct 35 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1
Score = 235 bits (260), Expect = 2e-57
Identities = 145/155 (94%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 4828 TTGCTTTCTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 4887
|||| | ||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 155 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 96
Query 4888 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 4947
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 95 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 36
Query 4948 GGCCAGGCGTCTTCGCTCATCTATGGGATCGCCAC 4982
| ||||||||||||| |||||||| ||||||||||
Sbjct 35 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1
Score = 176 bits (194), Expect = 2e-39
Identities = 109/117 (93%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 4520 TGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 4579
||||| |||||||||||||||||| ||||| || || |||||||| ||||||||||||||
Sbjct 331 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 272
Query 4580 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 4636
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 271 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 215
Score = 152 bits (168), Expect = 2e-32
Identities = 104/117 (89%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 59844 TGCTGCTCCCAGCTCCACTCTCAGCTTCCCAACCGTAAGCGCAATCTCCTCGTTCTCCTG 59903
||||| | | ||||| || | ||| ||||| || || |||||||| ||||||||||||||
Sbjct 331 TGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTG 272
Query 59904 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCAC 59960
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 271 GTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 197221877730432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |