Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq86 1557 0.0 >seq86 Length=863 Score = 1557 bits (1726), Expect = 0.0 Identities = 863/863 (100%), Gaps = 0/863 (0%) Strand=Plus/Minus Query 29639 AACTCATTGATACTCATTTATAAACTCCTTGCAATGTATGTCGTTTCAGCTAAACGGTAT 29698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 863 AACTCATTGATACTCATTTATAAACTCCTTGCAATGTATGTCGTTTCAGCTAAACGGTAT 804 Query 29699 CAGCAATGTTTATGTAAAGAAACAGTAAGATAATACTCAACCCGATGTTTGAGTACGGTC 29758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 803 CAGCAATGTTTATGTAAAGAAACAGTAAGATAATACTCAACCCGATGTTTGAGTACGGTC 744 Query 29759 ATCATCTGACACTACAGACTCTGGCATCGCTGTGAAGACGACGCGAAATTCAGCATTTTC 29818 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 743 ATCATCTGACACTACAGACTCTGGCATCGCTGTGAAGACGACGCGAAATTCAGCATTTTC 684 Query 29819 ACAAGCGTTATCTTTTACAAAACCGATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAG 29878 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 683 ACAAGCGTTATCTTTTACAAAACCGATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAG 624 Query 29879 ACATCATATGCAGATACTCACCTGCATCCTGAACCCATTGACCTCCAACCCCGTAATAGC 29938 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 623 ACATCATATGCAGATACTCACCTGCATCCTGAACCCATTGACCTCCAACCCCGTAATAGC 564 Query 29939 GATGCGTAATGATGTCGATAGTTACTAACGGGTCTTGTTCGATTAACTGCCGCAGAAACT 29998 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 563 GATGCGTAATGATGTCGATAGTTACTAACGGGTCTTGTTCGATTAACTGCCGCAGAAACT 504 Query 29999 CTTCCAGGTCACCAGTGCAGTGCTTGATAACAGGAGTCTTCCCAGGATGGCGAACAACAA 30058 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 503 CTTCCAGGTCACCAGTGCAGTGCTTGATAACAGGAGTCTTCCCAGGATGGCGAACAACAA 444 Query 30059 GAAACTGGTTTCCGTCTTCACGGACTTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCC 30118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 443 GAAACTGGTTTCCGTCTTCACGGACTTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCC 384 Query 30119 CATCCGAGATAACACCTTCGTAATACTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTT 30178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 383 CATCCGAGATAACACCTTCGTAATACTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTT 324 Query 30179 CAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGC 30238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 323 CAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGC 264 Query 30239 GTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGTG 30298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 263 GTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGTG 204 Query 30299 TTACCAATTCATGGAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTG 30358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 203 TTACCAATTCATGGAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTG 144 Query 30359 CCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGAT 30418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 143 CCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGAT 84 Query 30419 AAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAACGACCAGGCGTCT 30478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83 AAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAACGACCAGGCGTCT 24 Query 30479 TCGTTCATCTATCGGATCGCCAC 30501 ||||||||||||||||||||||| Sbjct 23 TCGTTCATCTATCGGATCGCCAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155084389316064