Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08]
223 sequences; 9,369,803 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq43 141 1e-29
seq30 132 8e-27
>seq43
Length=75330
Score = 141 bits (156), Expect = 1e-29
Identities = 196/269 (73%), Gaps = 4/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| | | ||| |||| |||| ||||| ||||| ||||| ||||||||||
Sbjct 66747 CGCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATTCAAGGTATCACAAAGCCAGCTA 66689
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|| | | |||| | | ||||| || || ||| | |||| || | ||||| |||
Sbjct 66688 TCAGAAGATTGGCCAGAAGAGGTGGTGTTAAACGTATTTCTGCTTTAATTTATGAGGAGG 66629
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACC 16609
|||| | ||||||||||| ||| | | | ||| ||| |||||| || || || ||
Sbjct 66628 TTCGAGCTGTTTTGAAGACTTTCTTGGAAAACGTGATCAGAGATGCTGTTACA-TACACT 66570
Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669
|||||||| || | ||||| || || || ||||| | |||||||| |||| | |||
Sbjct 66569 GAGCACGCCAAGAGGAAGACCGTGACATCATTGGATGTTGTCTATGCCCTGAAGAGACAA 66510
Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|| |||| | |||||||| ||| ||||
Sbjct 66509 GGACGTACTTTGTATGGTTTCGGAGGTTA 66481
>seq30
Length=475869
Score = 132 bits (146), Expect = 8e-27
Identities = 191/267 (72%), Gaps = 2/267 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | | ||| |||| |||| ||||| ||||| ||||| |||||||||||
Sbjct 94992 GCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATTCAAGGTATCACAAAGCCAGCTAT 94934
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | |||| | | ||||| || |||||| | || | ||| |||| ||||| |
Sbjct 94933 CAGAAGATTGGCCAGAAGAGGTGGTGTTAAGCGTATTTCCGCTTTGATCTACGAAGAAGT 94874
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| ||| | ||| ||| || |||||| | || || ||
Sbjct 94873 CAGAGCTGTGCTGAAGACTTTCTTAGAGAACGTCATTAGAGATGCTGTTACTTACACTGA 94814
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||| || || | |||||||| || || ||||| ||||||| || |||||| | |||||
Sbjct 94813 GCATGCCAAGAGAAAGACTGTTACTTCTCTGGATGTCGTCTACGCTTTGAAAAGACAAGG 94754
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||| | |||||||| ||| ||||
Sbjct 94753 ACGTACCTTGTATGGTTTCGGAGGTTA 94727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074996109539
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |